Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele22g1849 ATGTCCGGCCGAAGAACTTCGTCGTCAAAACTCTCAGAGAATGAGATTAATGAGATTGTTTCCAGGTTACAGACAGTACTTCCACGACTGAACCGAGGAACCAACTCAAGGGCATCGGTATCGAAGATTGTGAAAGAAGCTTGCTGTCACGTGAAGAAGCTTCAGAAAGAGGTGGACGAGCTTAGTGAGAAACTTTCAGGGTTGATGGATTCTGTGGATATAAGTGAGATTGATGAACAAAGCCTTCGAAATATTCTTCAACAATGA 267 0.4307 MSGRRTSSSKLSENEINEIVSRLQTVLPRLNRGTNSRASVSKIVKEACCHVKKLQKEVDELSEKLSGLMDSVDISEIDEQSLRNILQQ 88
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele22g1849 88 Gene3D - 10 86 IPR036638 GO:0046983
Lele22g1849 88 Coils Coil 44 71 - -
Lele22g1849 88 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 14 71 IPR036638 GO:0046983
Lele22g1849 88 PANTHER DNA BINDING PROTEIN 1 88 IPR044172 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele22g1849 Lele-ChrLele22 23468452 23468821 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele22g1849 4 73 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G47710 39.437 1.30e-13 58.9