Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele22g1845 ATGAATGATATGATGCAGGAGGATCAGATGATTACAAACCAATCTGCAGCACATTCTCACAGAGGCCGAACGGTTTTCTCAAGAGCTTATCTTCCTCTTATGGGAAATTGCTTTCGACATCATCGTCACAAGGCTGATCGTACTCTCCCCTCTTCTCACCCTATTTCCGGTTCTACACAAGTTTCTAGTAGAAGCATCACCCATTCCTATGCTCATTCGGGTCCAGTGAAAGGATACAGTGATAAAGCCAAACCTCAGACACTCCCTACTCCAAGATTGGAAGGTGTCATATTATCCTCTCTACATTTGAAAGCCTTCACATTCAACGATCTTAAGGATATTACTCGAAACTTTTGTCCTGACAATCTACTCGGAGAAGGGGGATTTGGTAAAGTCTACAAGGGGTGGATTGATGAACAGTCTTTTGGACCTGCAATGCCTGGTTCTGGAATGGCTGTAGCTGTAAAGAGCCTTAAATCTGATGGTTTTCAAGGGCATAAGGAGTGGCTGTCTGAACTCAATTATCTTGGTCATCTTCATCATCCAAATCTTGTCAAGCTTTTCGGATTCTGCCTGGATGGGGATAGTCGGCTTCTGGTATACGAGTACATGCCCAAGGGCAGCTTGGAGGATCATCAGTTTCGCAGGGGTGCAGAACCACTTCCTTGGGCAACAAGGATCAAAGTTGCTATTGGTGCGGCTCGAGGCCTCGCCTTCCTCCATGACTCTGAACAACAAGTTATCTACCGTGACTTCAAGGCTTCTAACATCTTATTAGATTCGGAATTTAATGCAAAACTCTCAGACTTTGGTTTTGCCAAAGCAGGGCCCACCGGCGATCGTACTCATGTTTCCACTCAAGTCCTTGGTACTCGTGGCTATGCTGCTCCTGAATATATTCTCACAGGTTGGTTGACTGCAAGGTGTGATGTGTATAGCTTTGGGGTTGTGCTATTGGAACTACTATCAGGACGGCGTGCCATCGATGCAACAAAATCCGGAGTCGAACAGAATCTGGTAGATTGGGCAAGACCTTATTTGGGTGACAGGAGGAAGTTATTCAGGATTATGGATAGTAAGTTAGAAGGGCAGTATCCACAGAGGGAAGCTTATACAGCTGCAAGTCTTGCTTTACAGTGCATCAGAGAGGCCAAAATGAGACCCCAGATGTCTGAAGTTCTGGCTACTCTTGAACAGCTTCAACTTGCCAGAACATCCAGAGCAGACAAGAGCCCCTCCTTAAGCCCTGTGGTAGAGCGATGTCATACTACAGAAATATCCTCTTTGAGACATAATAATCCTCATTCAACAACAGAGAGAAGGTCTATCTCCAATCACTTAGGTGAGAGCACTATGAGATCCCCTTCGGCATCTCCCAAATTAGAGTCTAACAAGAGTGGATATCCTCTTCATGTGGATATCACTGCGTAG 1431 0.4542 MNDMMQEDQMITNQSAAHSHRGRTVFSRAYLPLMGNCFRHHRHKADRTLPSSHPISGSTQVSSRSITHSYAHSGPVKGYSDKAKPQTLPTPRLEGVILSSLHLKAFTFNDLKDITRNFCPDNLLGEGGFGKVYKGWIDEQSFGPAMPGSGMAVAVKSLKSDGFQGHKEWLSELNYLGHLHHPNLVKLFGFCLDGDSRLLVYEYMPKGSLEDHQFRRGAEPLPWATRIKVAIGAARGLAFLHDSEQQVIYRDFKASNILLDSEFNAKLSDFGFAKAGPTGDRTHVSTQVLGTRGYAAPEYILTGWLTARCDVYSFGVVLLELLSGRRAIDATKSGVEQNLVDWARPYLGDRRKLFRIMDSKLEGQYPQREAYTAASLALQCIREAKMRPQMSEVLATLEQLQLARTSRADKSPSLSPVVERCHTTEISSLRHNNPHSTTERRSISNHLGESTMRSPSASPKLESNKSGYPLHVDITA 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele22g1845 476 ProSitePatterns Protein kinases ATP-binding region signature. 124 156 IPR017441 GO:0005524
Lele22g1845 476 MobiDBLite consensus disorder prediction 424 463 - -
Lele22g1845 476 Gene3D Transferase(Phosphotransferase) domain 1 204 418 - -
Lele22g1845 476 FunFam Serine/threonine-protein kinase BIK1 86 203 - -
Lele22g1845 476 MobiDBLite consensus disorder prediction 424 476 - -
Lele22g1845 476 Pfam Protein tyrosine and serine/threonine kinase 122 394 IPR001245 GO:0004672|GO:0006468
Lele22g1845 476 ProSiteProfiles Protein kinase domain profile. 118 400 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele22g1845 476 Gene3D Phosphorylase Kinase; domain 1 93 203 - -
Lele22g1845 476 SUPERFAMILY Protein kinase-like (PK-like) 93 397 IPR011009 -
Lele22g1845 476 CDD STKc_IRAK 124 400 - -
Lele22g1845 476 FunFam Serine/threonine-protein kinase PBS1 204 414 - -
Lele22g1845 476 MobiDBLite consensus disorder prediction 45 64 - -
Lele22g1845 476 PANTHER OS01G0588500 PROTEIN-RELATED 65 401 - -
Lele22g1845 476 ProSitePatterns Serine/Threonine protein kinases active-site signature. 247 259 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele22g1845 Lele-ChrLele22 23432983 23435669 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele22g1845 64 397 Glycoside Hydrolase AT3G07070 47.977 8.93e-104 314
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Lele22g1845 PK_Tyr_Ser-Thr 5.7e-42 CL0016