Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele22g1837 ATGATCAGGTGGATCGTAAACCGAGGAGTTCAAGCTCCGACTTCGCGGAAGTCTCTTGCTGTTTTCTGCCTCTCACGGTCTGCTCATTCATCATTTGCAACTGTTGAAGCTGAAGAGATATCAGGTTCTAGAACTGCTGAAGTTCACAACTTGGTGCAGGGTAAATGGATAGGATCCTCAAAGTGGAACACTATTGTGGATCCTTTAAATGGAGAACCCTTTATTAAAGTTGCTGAAGTTGATGAAACGGGCATTCAGCCTTTTATGGAAAGCTTGTCTAGCTGTCCGAAACATGGTCTGCACAATCCCTTTAAAGAACCGGAGAGATATCTCTTATATGGAGAAATATCTGCTAAGGCAGCTCACATGCTATCACTTCCAAAGGTTTCAGATTTCTTTACAAGGCTGATACAACGGGTTTCTCCAAAGAGTTATGCACAGGCGCATGCAGAAGTTTACGTAACACGGAAGTTTTTAGAGAATTTTTCTGGAGATCAGGTTCGTTTCTTGGCAAGGTCTTTTGGAGTACCTGGAAATCACCTTGGACAGCAAAGTCATGGTTTTCGCTGGCCATATGGCCCGGTGGCACTCATTACTCCTTTTAATTTTCCCTTAGAGATACCAGTCCTTCAGTTAATGGGTGCACTTTACATGGGCAACAAACCAGTCCTTAAAGTCGACAGCAAGGTGAGCATCGTCATGGACCAAATGCTACGTCTGCTTCATTGCTGTGGGTTGCCTGTTGAAGATGTTGACTTCATAAATTCTGATGGGAAGACAATGAACAAGCTATTGCTGGAGGCAAAACCTCGAATGACCCTTTTCACTGGTAGCTCAAGAGTGGCTGAAAAATTGGCTGGTGATTTAAAGGGTCGCATTAAATTGGAAGATGCTGGATTTGACTGGAAAGTACTAGGCCCTGATGTCCAAGAGGAAGACTATGTTGCCTGGGTATGTGACCAGGACGCATATGCATGTAGTGGCCAGAAGTGCTCAGCACAATCATTGTTATTCATTCACGAGAACTGGTCTAAAGATTCACTGATATCTAAGTTGAAGGATCTTGCTGAGAGAAGAAAGCTAGAAGACTTGACCATTGGTCCAGTGCTGACTGTAACAACTGAATCAATGCTAGAGCACAAGAATAACTTACTTCAGATACCAGGTTCAAAGCTGCTCTTTGGGGGCCAGCCTTTAGAGAAACATACAATTCCTTTGATATATGGTGCTATAAAACCAACTGCCATTTATATTCCTCTTGAGGAAATCGTGAAGGAAAAAAATTATGAGCTTGTTACAAAAGAAATTTTTGGCCCTTTCCAGGTTATTACTGACTATACAAGCGATCAACTCCCAGTGGTACTAGATGCTTTGGAGAGAATGGATGCCCGTTTAACAGCTGCTGTAGTTTCAAATGATCCCCACTTTTTACAGGAAGTCATTGGCAAAACAGTAAATGGGACTACTTATGCTGGTCTAAGAGCAAGAACTACTGGAGCTCCGCAGAACCACTGGTTTGGACCTGCTGGGGATCCTAGAGGCGCAGGAATCGGAACCCCAGAGGCGATAAGGCTTGTCTGGTCTTGCCACAGAGAGATTATTTATGATGTGGGCCCCATTCTTGAGAATTGGGAAATTCCACCTTCATCTTAA 1653 0.4356 MIRWIVNRGVQAPTSRKSLAVFCLSRSAHSSFATVEAEEISGSRTAEVHNLVQGKWIGSSKWNTIVDPLNGEPFIKVAEVDETGIQPFMESLSSCPKHGLHNPFKEPERYLLYGEISAKAAHMLSLPKVSDFFTRLIQRVSPKSYAQAHAEVYVTRKFLENFSGDQVRFLARSFGVPGNHLGQQSHGFRWPYGPVALITPFNFPLEIPVLQLMGALYMGNKPVLKVDSKVSIVMDQMLRLLHCCGLPVEDVDFINSDGKTMNKLLLEAKPRMTLFTGSSRVAEKLAGDLKGRIKLEDAGFDWKVLGPDVQEEDYVAWVCDQDAYACSGQKCSAQSLLFIHENWSKDSLISKLKDLAERRKLEDLTIGPVLTVTTESMLEHKNNLLQIPGSKLLFGGQPLEKHTIPLIYGAIKPTAIYIPLEEIVKEKNYELVTKEIFGPFQVITDYTSDQLPVVLDALERMDARLTAAVVSNDPHFLQEVIGKTVNGTTYAGLRARTTGAPQNHWFGPAGDPRGAGIGTPEAIRLVWSCHREIIYDVGPILENWEIPPSS 550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele22g1837 550 Pfam Aldehyde dehydrogenase family 117 493 IPR015590 GO:0016491
Lele22g1837 550 PANTHER ALPHA-AMINOADIPIC SEMIALDEHYDE DEHYDROGENASE 29 548 IPR044638 GO:0004029
Lele22g1837 550 FunFam probable aldehyde dehydrogenase 41 299 - -
Lele22g1837 550 FunFam Aldehyde dehydrogenase 12 307 495 - -
Lele22g1837 550 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 45 309 IPR016162 GO:0016491
Lele22g1837 550 SUPERFAMILY ALDH-like 48 518 IPR016161 GO:0016491
Lele22g1837 550 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 310 493 IPR016163 GO:0016620
Lele22g1837 550 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 324 335 IPR016160 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele22g1837 Lele-ChrLele22 23368373 23375187 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele22g1837 1 550 Aldehyde Dehydrogenase Gene Family AT5G62530 78.957 0.0 929
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele22g1837 22 23368373 23375187 Lele22g1837 22 23368373 23375187 ECH
Lele22g1837 22 23368373 23375187 Lele23g0147 23 941055 948407 hybridization
Lele22g1837 22 23368373 23375187 Lele24g1789 24 22998722 23005743 hybridization