Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele22g1824 ATGGGAAATTGCAACGCTTGTGTGAAACCAGAAGTTTCAGAAGAACCGTCGAACAACCACACAAACCACAGGAAGAAGAAGAAATCTAAGGACAGAAGACAAAACCCGTTCGCAGAGGACGCAATTCACTCGCCGGCTCCGATCCGAGTCCTGAAGGACGTGATTCCACTGAGTCACCGAACCCGTATCAGCGACAAGTACATACTCGGACGCGAGCTGGGTCGCGGCGAGTTTGGGATCACCTACCTCTGTACCGACAGAGAAACAAAAGAAGCACTGGCCTGCAAATCGATTTCAAAACGAAAGCTACGAACGGCGGTGGATATAGAAGACGTAAGGCGCGAGGTTGCTATAATGTCAACTCTTCCTGATCATCCAAACATCGTGAAGCTCAAAGCGACTTACGAAGATAACGATAATGTTCATCTCGTTATGGAGCTCTGTGAGGGCGGTGAGCTCTTTGACCGGATTGTCGCCAGAGGACATTACAGTGAACGCGCCGCCGCAACGGTCGCCAGAACGATAGCAGAAGTTGTGAGGATGTGTCATGCCAACGGAGTCATGCACAGAGATCTCAAGCCTGAGAACTTCCTTTTCGCGAACAAGAAGGAGAATTCAGTCCTTAAGGCCATTGATTTTGGACTCTCTGTGTTTTTCAAGCCTGGAGAAAGATTTTCGGAGATCGTCGGGAGTCCGTACTATATGGCGCCGGAGGTTTTGAGAAGAAACTACGGGCCGGAGGTCGATATATGGAGCGCCGGCGTTATTCTGTACATATTGTTATGTGGGGTTCCTCCGTTTTGGGCGGAGTTGGTAGCATTTATTGCAGAGACGGAACAGGGCGTGGCCTTGGCTATTTTGAGGGGTGTGATTGATTTTAAGAGAGAACCTTGGCCTCAGATATCTGATAGTGCGAAAAGCCTAGTGCGGCAGATGTTGGAGCCAGATCCTAAAAAACGGTTGACAGCTCAACAAGTTCTTGAACATCCATGGCTACAAAATGCGAAGAAAGCTTCGAATGTTCCATTAGGAGATATCGTGAGGACGAGGCTGAAGCAGTTCTCCATGATGAATAGATTTAAAAAGAAAGCTCTTTGGGTAATAGCAGAGTATTTGTCTATTGAAGAGGTAGAGATAATCAAAGACATGTTTACATTAATGGATAGTGATGGAGATGGGAAAGTAACATATGAGGAACTCAAGACCGGGTTGCGAAAAGTTGGTTCACAACTTGCTGAGCCAGAGATAAAGATGTTGATGGAAGTGGCTGACGTGGACGGGAATGGAGCACTTGACTATGGAGAATTTGTGGCAGTGACGATTCACCTGCAAAGAATGGAGAATGACGAACATTTCCGGAAAGCATTCAAGTATTTTGACAAAGATGAGAGTGGTTATATTGAGTTAGGGGAACTACGAGATTCATTAGCAGATGAATCTGGTGAAATTGAGGCCGATGTTGTCCATGACATCATGCGTGAGGTTGACACTGACAAGGATGGGCGCATAAGCTATGAGGAGTTTGTGGCAATGATGAAAACAGGAACTGACTGGAGAAAAGCATCCAGACAGTATTCAAGAGAGAGATTCAAGAGTCTCAGTCTAAATTTGATGAAAGATGGTTCACTTCAGCTTCTTGATGGAATTAGCGGTGAAGCGGTGGTTGTTTGA 1671 0.4626 MGNCNACVKPEVSEEPSNNHTNHRKKKKSKDRRQNPFAEDAIHSPAPIRVLKDVIPLSHRTRISDKYILGRELGRGEFGITYLCTDRETKEALACKSISKRKLRTAVDIEDVRREVAIMSTLPDHPNIVKLKATYEDNDNVHLVMELCEGGELFDRIVARGHYSERAAATVARTIAEVVRMCHANGVMHRDLKPENFLFANKKENSVLKAIDFGLSVFFKPGERFSEIVGSPYYMAPEVLRRNYGPEVDIWSAGVILYILLCGVPPFWAELVAFIAETEQGVALAILRGVIDFKREPWPQISDSAKSLVRQMLEPDPKKRLTAQQVLEHPWLQNAKKASNVPLGDIVRTRLKQFSMMNRFKKKALWVIAEYLSIEEVEIIKDMFTLMDSDGDGKVTYEELKTGLRKVGSQLAEPEIKMLMEVADVDGNGALDYGEFVAVTIHLQRMENDEHFRKAFKYFDKDESGYIELGELRDSLADESGEIEADVVHDIMREVDTDKDGRISYEEFVAMMKTGTDWRKASRQYSRERFKSLSLNLMKDGSLQLLDGISGEAVVV 556
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele22g1824 556 Pfam EF-hand domain pair 380 439 IPR002048 GO:0005509
Lele22g1824 556 Pfam EF-hand domain pair 450 513 IPR002048 GO:0005509
Lele22g1824 556 Gene3D Phosphorylase Kinase; domain 1 68 152 - -
Lele22g1824 556 SMART serkin_6 67 332 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele22g1824 556 ProSiteProfiles EF-hand calcium-binding domain profile. 375 410 IPR002048 GO:0005509
Lele22g1824 556 ProSiteProfiles Protein kinase domain profile. 67 332 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele22g1824 556 ProSitePatterns EF-hand calcium-binding domain. 460 472 IPR018247 -
Lele22g1824 556 Gene3D Transferase(Phosphotransferase) domain 1 153 340 - -
Lele22g1824 556 Pfam Protein kinase domain 69 332 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele22g1824 556 ProSiteProfiles EF-hand calcium-binding domain profile. 483 518 IPR002048 GO:0005509
Lele22g1824 556 ProSitePatterns EF-hand calcium-binding domain. 424 436 IPR018247 -
Lele22g1824 556 ProSitePatterns Serine/Threonine protein kinases active-site signature. 187 199 IPR008271 GO:0004672|GO:0006468
Lele22g1824 556 ProSiteProfiles EF-hand calcium-binding domain profile. 411 446 IPR002048 GO:0005509
Lele22g1824 556 SUPERFAMILY Protein kinase-like (PK-like) 51 357 IPR011009 -
Lele22g1824 556 ProSitePatterns Protein kinases ATP-binding region signature. 73 96 IPR017441 GO:0005524
Lele22g1824 556 FunFam calcium-dependent protein kinase 13 153 340 - -
Lele22g1824 556 ProSitePatterns EF-hand calcium-binding domain. 496 508 IPR018247 -
Lele22g1824 556 FunFam Calcium-dependent protein kinase 1 69 152 - -
Lele22g1824 556 SMART efh_1 487 515 IPR002048 GO:0005509
Lele22g1824 556 SMART efh_1 415 443 IPR002048 GO:0005509
Lele22g1824 556 SMART efh_1 451 479 IPR002048 GO:0005509
Lele22g1824 556 SMART efh_1 379 407 IPR002048 GO:0005509
Lele22g1824 556 ProSitePatterns EF-hand calcium-binding domain. 388 400 IPR018247 -
Lele22g1824 556 Gene3D - 341 516 - -
Lele22g1824 556 CDD STKc_CAMK 66 331 - -
Lele22g1824 556 ProSiteProfiles EF-hand calcium-binding domain profile. 447 482 IPR002048 GO:0005509
Lele22g1824 556 MobiDBLite consensus disorder prediction 1 42 - -
Lele22g1824 556 SUPERFAMILY EF-hand 360 539 IPR011992 -
Lele22g1824 556 CDD EFh 451 513 IPR002048 GO:0005509
Lele22g1824 556 FunFam Calcium-dependent protein kinase 7 341 516 - -
Lele22g1824 556 PANTHER SERINE/THREONINE-PROTEIN KINASE 46 508 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele22g1824 Lele-ChrLele22 23285697 23288277 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele22g1824 1 556 EF-hand Containing Proteins AT1G18890 80.216 0.0 911
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Lele22g1824 Pkinase 2.5e-76 CL0016