Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele22g1822 ATGACCCTTAAGGGTGGCACGACCCAGGCTTGTGCAGCTTGCAAATACCAGAGAAGGAAATGCACATCTGAATGCCTTCTTGCTCCATATTTCCCTGCAGACCAACCCAAGATATTTCAGAATGTGCACAAGTTATTTGGAGTGAGCAATATTAAGAAGATGTTGAAGAAATTGGATCCTACCCAGAAGAAAATAGCCATGGATTCAATAATCTGCCAAGCAAATATTAGGGATAAGTACCCTGTTCATGGCTGCTGGGAAGAAATTTGCAGGCTCCGTTACCAGATTTGGCGGATGGAAGAGGAGCTTCATGCTGTTCATCAGCAGCTTGAGATTTGCAGGCAACATTACCAGCAAAATCTTGATCATAATCTTCCTGAGGATAATCATGTGGCTTCTCAACTAGAGTTGGGCATCACACCTTGCTTTAATGGCCTTCAACTGTTTGATCAAATGCCTCAACCACAAGATTACAACCATATGATGGCTGAATCTTTGCCTATGTCTCAGCAGCAGCAGCAACAACATTCTTTCTCAAATAGCAATAATGAGGCTTATAATAATTCCCTTTACATTGATCCCAAGGATAGTAGTGTGCCCAATCATTTATGGGTTGATCATCGTTATGGTGATAACGATAGCAGTTCCATGGCAATGGAGTCTCAATTGGACGCTGCCTCAGCGCAGCGACTAGTCATTCAACAAGGAGAAGTTGCTGAAGATTATGATGACATGCATCCGTTTTTTGATACTATTGATGATAGACAATCATACGTTTATTCTAAGGAGGCTTATGAGTCAAGTTCTGAAGAATCGTTGAAAGATACGCCAAAGTGCACGGAGCATGTTGCTGAGAATGAATTGAAGAATGCTGCTGCATGCTTTAGTCTTACCAGTGTTAACTGA 906 0.4194 MTLKGGTTQACAACKYQRRKCTSECLLAPYFPADQPKIFQNVHKLFGVSNIKKMLKKLDPTQKKIAMDSIICQANIRDKYPVHGCWEEICRLRYQIWRMEEELHAVHQQLEICRQHYQQNLDHNLPEDNHVASQLELGITPCFNGLQLFDQMPQPQDYNHMMAESLPMSQQQQQQHSFSNSNNEAYNNSLYIDPKDSSVPNHLWVDHRYGDNDSSSMAMESQLDAASAQRLVIQQGEVAEDYDDMHPFFDTIDDRQSYVYSKEAYESSSEESLKDTPKCTEHVAENELKNAAACFSLTSVN 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele22g1822 301 Pfam Lateral organ boundaries (LOB) domain 10 107 IPR004883 -
Lele22g1822 301 MobiDBLite consensus disorder prediction 166 187 - -
Lele22g1822 301 ProSiteProfiles LOB domain profile. 9 110 IPR004883 -
Lele22g1822 301 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 8 175 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele22g1822 Lele-ChrLele22 23270380 23271606 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele22g1822 1 264 AS2 family AT3G47870 40.127 8.14e-59 189
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Lele22g1822 LOB 7e-34 No_clan