Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele22g1817 ATGAAAGCTGTTCTGTATTTGAGCTTCTCGATCTTTTGCTTGCTTCTGCTTTTGATTTGTTCGGTTTCACTTCCTCTATGTGTTGATTCCGGAGCACCCTTTACTCTCAACACGACACTGAGGTTTTGTCCTTATAATGGAAGCACGTGCTGCAACTCCACAGAAGATGCAAAACTAGCAAAGCAATTCCAAGTGATGAATATATCTAATTCTGGCTGTGCTTCCCTTTTGAAATCAATACTTTGTGCGAGGTGTGACCCATTTTCGGCTGAGCTATTTACAGTTCAATCCTCTCCTAGATCGGTTCCTGTCCTTTGCAATTCTACCATTTCGACAAATACTACTCAGTCAAAGGCGGCAGTAGAGGACTACTGCTCCATAGTTTGGGATACATGCCAGAATGTGTCCATAGCAAATTCTCCATTTTCTCCTACTTTGCGAGGTGGAGGAGCTACGGTAAGTACTGAAGCTGCCAAGCTCACTGAACTTTGGCAGTCCAAAACTGATTTCTGCAAAGCATTTGGTGGAGCTTCAAGTGGTGAATCAGTATGTTTTGATGGTGAACCTGTTGAGCTAAATAAAACTAAGACTTCCAATAGCCCTCCAGATGGCTTGTGTCTTGAGAAAATTGGCAATGGATCTTATCTCAACATGGTTGCTCATCCTGATGGTTCTAATCGCGCTTTCTTCTCTAACCAAATGGGTAAGATATGGTTGGCAACACTTCCAGCTGAGGGTTCAGGAGGGACAATGGAACTTGATGAATCTAGCCCCTTTGTTGACCTAACCGATCGAGTCTATTTCGATTCAGCATTCGGAATGATGGGCATGGCATTTCATCCAGACTTTGCAAAAAACGGACGATTTTTCACGTCATATAATTGCGATAAGTCTAAGTCACCACAATGTGCAGGAAGATGTTCATGTAATTCGGATGTTAATTGTGATCCATCAAAGCTAGGTACTGAAAATGGTGCCCAACCATGCCAGTATCATACTGTTATAGCAGAATATACTGTTAATGGTACCGCGACCCAGCCTTTGATGGCGGAAAGTGCTAAACCCATAGAGGTAAGAAGGATATTCACCATGGGTCTCCCATTTACGTCTCAACATGGAGGTCAGATACTCTTTGGACCTGATGATGGGTATTTATACTTCATGATGGGATATGGAGGTGGCAGTGGTGATCCATATAATTTTGCCCAGAACAAGAAATCATTGCTTGGAAAGATCATGAGACTTGATATTGACAACATTCCAAGTGCAGAAGAAATTGCCAAACTTGGTCTTTGGGGTAACTACTCTATTCCTAAGGATAATCCATTTGCTGAAGATGCAGATCTCCAGCCTGAAATATGGGCATTGGGATTTAGAAATCCTTGGCGCTGTAGCTTTGATTCAGAAAGACCATCCTACTTTGTGTGTGCAGATGTTGGCCAGGATCTTTTTGAGGAGGTGGATCTCGTTACTAAAGGTGGGAACTACGGGTGGCGTGTTTATGAGGGCCTTTACAAATTCACCCCAAAAGATTCACCCGGAGGCAACACTTCTTTGAACTCCATAAATCCAATATTCCCAATAGCAGGTTACAACCATTCGGAAGTAAACAAGAATGAAGGATCAGCCTCCATCACTGGCGGCTATTTCTATAGGTCTATGACTGATCCTTGCATGTATGGAAGGTACTTGTATGGAGATCTGTATGCAGTTGCTATATGGTCGAGCATTGAGGATCCAGAAAATAGTGGAAACTTCACTACCAACAAAATCCCTTTCAGTTGTGCACGCGATTCTCCTATCAAATGTGACTCTGTACCTGAAAGCTCCCAGGCATCTATTGGTTACATCTTCTCATATGGGGAAGACAACAATAAGGATGTTTATGTGCTTGCAAGCTCTGGTGTTTACCGTGTCGTTCGTCCGAGTCGATGCGGTTACACTTGCTCGAAGGAAACTGCTGCCCCAACAGTTTCTAGCCCAGAACCTTCTCCACCAAATGCAAGCCGTGGGAGTATCCTTTCTGACAATCTGTTTCTGCAGCTTTCATATTTCCTGTTGTATCTTACGTGTTATCGTCTTCTGAACATTATGTAA 2097 0.4311 MKAVLYLSFSIFCLLLLLICSVSLPLCVDSGAPFTLNTTLRFCPYNGSTCCNSTEDAKLAKQFQVMNISNSGCASLLKSILCARCDPFSAELFTVQSSPRSVPVLCNSTISTNTTQSKAAVEDYCSIVWDTCQNVSIANSPFSPTLRGGGATVSTEAAKLTELWQSKTDFCKAFGGASSGESVCFDGEPVELNKTKTSNSPPDGLCLEKIGNGSYLNMVAHPDGSNRAFFSNQMGKIWLATLPAEGSGGTMELDESSPFVDLTDRVYFDSAFGMMGMAFHPDFAKNGRFFTSYNCDKSKSPQCAGRCSCNSDVNCDPSKLGTENGAQPCQYHTVIAEYTVNGTATQPLMAESAKPIEVRRIFTMGLPFTSQHGGQILFGPDDGYLYFMMGYGGGSGDPYNFAQNKKSLLGKIMRLDIDNIPSAEEIAKLGLWGNYSIPKDNPFAEDADLQPEIWALGFRNPWRCSFDSERPSYFVCADVGQDLFEEVDLVTKGGNYGWRVYEGLYKFTPKDSPGGNTSLNSINPIFPIAGYNHSEVNKNEGSASITGGYFYRSMTDPCMYGRYLYGDLYAVAIWSSIEDPENSGNFTTNKIPFSCARDSPIKCDSVPESSQASIGYIFSYGEDNNKDVYVLASSGVYRVVRPSRCGYTCSKETAAPTVSSPEPSPPNASRGSILSDNLFLQLSYFLLYLTCYRLLNIM 698
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele22g1817 698 FunFam HHIP-like 1 209 634 - -
Lele22g1817 698 PANTHER HEDGEHOG-INTERACTING PROTEIN 56 657 - -
Lele22g1817 698 Pfam Glucose / Sorbosone dehydrogenase 221 508 IPR012938 -
Lele22g1817 698 SUPERFAMILY Soluble quinoprotein glucose dehydrogenase 211 551 IPR011041 -
Lele22g1817 698 Gene3D - 199 633 IPR011042 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele22g1817 Lele-ChrLele22 23249165 23252335 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele17g1004 17 20811792 20815073 Lele22g1817 22 23249165 23252335 CCT
Lele18g0531 18 3131485 3136356 Lele22g1817 22 23249165 23252335 CCT
Lele19g0555 19 3199480 3201549 Lele22g1817 22 23249165 23252335 CCT
Lele21g1843 21 25937817 25943704 Lele22g1817 22 23249165 23252335 ECH
Lele22g1817 22 23249165 23252335 Lele22g1817 22 23249165 23252335 ECH
Lele22g1817 22 23249165 23252335 Lele23g0169 23 1069444 1072858 hybridization
Lele22g1817 22 23249165 23252335 Lele24g1772 24 22896136 22901242 hybridization