Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele22g1815 ATGACCATGTCCGAAGGAACTGCTTCTCATCCTCTTGTTTCTAACGAACCCTCTAATCGATCCTCGCCTGAACCCAATACTCAAGGCCATACATCTGATTCCCCCAACGACGTCGTTCCCACTTCTAAGGAGGAAACCGCCGCCGCTCCCACCACTACCAGGAGCAACCGCCCGTCTCGCGCCTGCACCATTCGAGCTGCTTCTCGTCTCTATTCAACAACGCAGCCGGCGAACGGTGGCCGGCGACTCAAAGGTTCGAAGAAGGAGCAGCAGCTGCCGGAGGACTTGCCGGAGCAACAGCAGCAATGTAGCAGGATTGTGACACCGCTTGTGGAGCCACCATCACCTTCGCAGTTGCCTCGGTGGAACCTGAGGTCTATGTGGGAGTTAGCTTCCGTACTCAATTTCTTGCATGTATTTAGGCCTCTTTTGAATATCTCAGCAGAGTTCTCGGCCGAAGAGTTTGAGACAGCTCTCCTTACCCCCAATGACACTTTGAGTGATATACACATGCCCTTGCTAAAGGTTCTAACCTGTAAGGATTATGCTAGTTTACTATTCTCTGTTTTTTATGTTTACTTATCTATACTTTCCTCTTCACAATTATGCATTTTTGCAAAACTGCAGGTTGCAAATGGGGAACTTCCTATTGTTGCTTCACATGGGTATGAAGATGACCCCATAATTGGCCATAGGTTGTATCGAGAAGTAAGGAAAACTGAAGTGATTCAAATGAGGAAAGGGAAACCAAAAGGTTCCCGGGTCAATTCTAGTACAACATATCAGTGGGAAGCAGTTGCTACTAATTTGGATGAATTTTTAGATGTCGCCAAAAAAGAGCGGTTGCTGAAAAAGCAACAAAGAGAAGCTCTTCTTCTTGATAATTTCTTGATTGTTGACGAGTTTGGTCCTGGGCGGTCACTTCGTGGTAGGAAACCTGTTACCTACACATTTGGTAAGAGCCAGAAAGCTTAA 975 0.4677 MTMSEGTASHPLVSNEPSNRSSPEPNTQGHTSDSPNDVVPTSKEETAAAPTTTRSNRPSRACTIRAASRLYSTTQPANGGRRLKGSKKEQQLPEDLPEQQQQCSRIVTPLVEPPSPSQLPRWNLRSMWELASVLNFLHVFRPLLNISAEFSAEEFETALLTPNDTLSDIHMPLLKVLTCKDYASLLFSVFYVYLSILSSSQLCIFAKLQVANGELPIVASHGYEDDPIIGHRLYREVRKTEVIQMRKGKPKGSRVNSSTTYQWEAVATNLDEFLDVAKKERLLKKQQREALLLDNFLIVDEFGPGRSLRGRKPVTYTFGKSQKA 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele22g1815 324 MobiDBLite consensus disorder prediction 1 101 - -
Lele22g1815 324 MobiDBLite consensus disorder prediction 1 80 - -
Lele22g1815 324 PANTHER REMODELING AND SPACING FACTOR 1 223 279 IPR028938 GO:0006355|GO:0031213
Lele22g1815 324 Pfam DDT domain 132 178 IPR018501 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele22g1815 Lele-ChrLele22 23242849 23246144 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR DDT Lele22g1815 DDT 3.8e-07 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele17g1005 17 20815592 20817077 Lele22g1815 22 23242849 23246144 CCT
Lele19g0554 19 3195793 3197279 Lele22g1815 22 23242849 23246144 CCT
Lele22g1815 22 23242849 23246144 Lele22g1815 22 23242849 23246144 ECH
Lele22g1815 22 23242849 23246144 Lele24g1771 24 22886616 22892017 hybridization