Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele22g1784 ATGATTGCTGGGATTGGCTTGGATTTGGGAAAATGCAAGGCTATGCATGGGCGTGGAGGTGAGGAGTGGAAAAGAACTCGGCACATGTGGACAAGCCCCACTCGTGGCCAACCGATTGTAAGCGCCGCTCCCGATGTTTCTTCTTCATCTTCGCCTTCCATTAATTCATTCTATAAGGACGGTCGTAAAATTAGTGTTGGTGACTGTGCTCTCTTCAAGCCACCTCAGAAGTGTCCACCTTTTATTGGGATAATTCGTTCACTGACAGTTGGCAAAGAGTGTAAACTGAAGATACTTGTTAATTGGCTTTATCGTTCAGCTGAAGTGAACCTTGGCAAAGGTCTCCTACTGGAGACTGTGCCAAACGAAGTTTTCTACTCCTTTCATACGGATGAGATTTCTGCTGCATCACTTCTGCATCCTTGTAAAGTTGCATTTCTTCCTAAAGGCGTTGAACTTCCATCAGGGACTTCGTCATTTGTGTGTAGGAGGGTTTATGACATTGCAAACAAGTGTTTATGGTGGTTAACTGACCAAGATTTTATTAATGTACTTCAAGAAGAAGTAGACCAGCTATTGTATAGAACTCGTATAGAAATGCATGCTACAGTGCAACCGGGTGGTCGATCTCCAAAGCCAATGAGTAGTCCAACATCATCACAGTTAAAATCAGGTTCAGATAGTGTACAGAATAGTGCTTCTTTTCCTTCTCAAGCTAAGGGAAGGAAAAGGGAGAGGGTAGATCAAGGGCCTGAGTCTGCTAAGCGAGAACGTACAACAAAAGTTGAGGATGGAGACTCTGGTCATTCTAGACAGGAGAACATTTTAAAGGCAGAGATTGCAAAAATTACAGAAAAGGGCGGGCTTGTCAATATTGAAGGGGTTGAGAAGCTTGTGCAGCTTATGGTTCCTGATAGGAATGTGAAAAAGATAGATTTGGCGAGCCGGTCAATGCTTGCTGCTGTTATTGCAGCGACAGATAAATTGGATTGTCTTAGTCAGTTTGTGCAGCTGAAGGGTTTGCCAGTGTATGATGAATGGCTTCAAGAAGTCCATAAAGGGAAGACTGGTGATGGAAGTGGGTCTAAGGACGGTGATAAATCTGTTGAAGAATTTCTTTTGGTATTACTTCGGGCACTTGATAAGCTTCCTGTAAATCTTCAAGCTCTACAGGCATGTAACATCGGTAAATCTGTGAATCATTTGCGAACTCATAAAAACTCAGAAATCCAGAAGAAAGCTAGGGGATTAGTTGACACATGGAAGAAACGTGTTGAAGCTGAAATGAATATCAATGATGCAAAAGCTGGCTCTGGTCAAACTGTCCCCTGGCCTACTAGAACACGCCTCTCTGATGTTGGCCAGGGTGGGAATAAAAATTCAGGCGGGTCATCTGATGTTGCTGTTAAGAGCTTGGTTACACAGCTTTCTGCATCCAGAACTTCCCCTGTGAAGATTACCCAGGGAGAAAATGCTGCCAGATCTGCATCTCCAGGGTCTATGAAGTCGGTGCCCTCACCAACCTCAGAAACTATAAACTCAAAAGATGGACAGGCCCGTGCTGCTACCCTCAGTGGAGTTTCTGAGAAAAGTAGTAGTTCTAGTCAATCTCATAATAACAGTCAATCTTGTTCCAGTGACCATGCTAAAACTGGGGGTTTTTCAGGAAAGGAGGATGCTAGGAGCTCTACTGCTATGAGTGTGAATAAAATATCAGGCAGTTCTTCACGGCACCGAAAGTCTGTTAATGGAATCTCAGGTTCAACTCCATCTGGAGGGCAAAGGGAGTCTGGTCGAAATTCCTCTGTACACAAAAATTCGTCTTCTGAAAAATTGTCACAATCTGGATTAACAGAAAAGGCGCATGATGGGACTTCTCTTGAGGGAAGTACCCCCAAGTTGATTGTTAAGATTCCAAACCGAGGTCGAAGTCCTGCAGAAAGTGCAAGTGGAGGTTCCTTTGATGATCCTTCAATAATGAACAGTCGAGCTTCATCTCCTGTTTTTTCAGAGAAGAATGATCAGTATGATCATAGCTCAAAGGAAAAGGTTGATTTTTATCGAGCTAATAATGGTGCAGATATTAATACTGAATCCTGGCAGAGTAATGATGTTAAAGATGTACTAACAGCATCTGATGAAGGCAATGGATCACCTGCTGCTGTTACTGATGAAGAACGCTGCAGGACTGTTGGCGATTCGAAGAAGATGGTGGAAGCATCAAAAGCTGCTTCATCATCATCTGGAAATGAACATAAGGCAGTAAATATTCAGGATGCTTCTTTCAGCTCCATAAATGCTTTGATAGATAGTTGTGTAAAGTATTCTGAAACTAATGCTTCTTTGTCTGCTGTTGATGATGTTGGAATGAAGCTTCTTGCCAGTGTAGCGGCTGGAGAGATTTCCAAATCCGAATTGACAACCCCTACTGGATCACCTGAAATAAACACAAATGCGGTGGAACAGTCATGTCCAGGTAATGCCATGGAGTGTGAAGGAAAGCTGGTTCAAAATGAATATCATGCGAATAATGGCATTGACGAACACAAGAAGCAGGATGCTGTATCTGGGGATTCACGTGCTAATAATGATAATGATTCGGGTCTTTTGGCATCTGAAGTGAAGGTTCCTGAGGAGCAAAATAGGCATATTACTTCATCTAGTAAGGATTTGCAGCGTGTTATGGAAGCCTGTCCAGAAAGCAAAGAAAAATTGAGTGAAATTTCAGTTGCCGCTTCATTGGCTGGCTTTCCTGAAAGCACTGTGCAAGAAGCCAGAGGGAGTGAATGTAGCAAACAGCTTAAGGAAAACAAAAATGGTGGGAATGTTAATGCAGGTGGAGATCTTGATGTTAAAGTTAATGAGTTTGCAAGAGAAGTTGAGGTGGACACTATTGACAAAACATCACATCCCTCTGTGGAGGTTGACCTGAAGGGTGGCAATTGTACAATTGAGGAATTAAGTAGTGGTGGACAGACAGCCCAGAAGGTTCCAGTGGTTGCTATGCAGGATTCAGTGAAAGGAACAGATGAGAATGTGCTACATCCTTTTGATGTTAGTGTTGGTAGGGCTGTAGAAGACCACAGTGAAAGGGACTGCAGAAAGACTGTTAATGTGGCTGCTCGAAGTCATTCAGGTCAGTCTGAAATCCAAAGAAATGAGTGTAAAAATGATGCTATGACAACACCTGAGAACAGAAGTATAGTCGGTTTAGGTTTCGGTGACACTTGCCTTGCTTCTGAACATGTGGAGGAGAATTCAGATACGAAAGAGGCTCAGGACCAGCACGGTGGGCATAATCTGCAGAGTGCGTCACTGAGCTTGCCTTCACAGGAAATGGAGCAGCATCCAGGCTCGAAAGAATCTAAATTGACTTCCACGGAAACAGAGGAAGCTGAAGAGTGCACTTCTGCCACTGCAGACGCCTCTTCCATTTCTGCAGCTGGTGCGTCTGATGTGATGGATTCAAAACTTGAGTTTGATTTAAATGAAGGCTTCAGTGCTGATGATGGAAAATCTGGAGAGTTCAATAGCATTCCTGTGCCTGGGTGTGCACCTGCAGTACGAGTGATCAGTCCGGTGCCATTTCCTGTTTCAACCATGTCTAGTGGTATTACTGCTTCAATCACTGTGGCTGCAGCTGCAAAGGGGCCCTTTGTGCCACCTGAAGACCTGTTGAAAAGTAAAGGGCAGCTTGGCTGGAAGGGATCAGCTGCCACCAGTGCATTCCGGCCTGCTGAGCCCAGAAAAATTGTAGAAATGCCTCTTGGTACACCAGCAGCAGCTCCCATATCTGATGCCACAGCTGGAAAGCAGAGTCGACAACTATTAGATATTGATTTAAATGTGCCTGATGAAAGGATGCTTGATGATATAGCCTCTCAACGTAGTTCTCATCAGCCAGCAGATGGTGTTTCCCCTGTTCGCTGCACTGGAGGTCTTGGTCTTGACTTAAACCAAGTAGATGAAGCTTCTGATGTGGGCAATTGCTCCATTAGCAATGGTCATAAAATGGATGTACAATTTCTGCAGGTGAACCCATCATCCAATGCTCTTCCAAATAGAGAGGCAAGCGCCCTTAGGGACTTTGATTTGAATGACGGACCTGCAGTTGATGAAGTCATCACGGAACCAACATTGTTCACTCACCAAGCCAGAAGCCGTTTACCATCACAGACTCCTGCATCTGGACCTAGAACGAGTAGTACTGAACTGGGGAGTTTCTCATCATGGTTTCCTTCCACTGGGAACACCTATTCAGCTGTCACAATATCCTCAATTATGCCTGATAGAGGGGATCAGCCCTTTTCAATTGTTGCCCCTAATGGGCCACAAAGAATGCTGGGTCCTGCTACTGGTGGCAGCCTATTTGGACCTGATGTTTATAGGGGACCAGTGCTGTCATCTTCTGCAATGCCATATCCATCTGCACCATATCAGTATCCTGTCTTCCCTTTTAATTCCAGCTTCCCTCTTCCATCGTCGTCATTTTCAGGTGGATCAACTACTTATGTAGATTCAGCATCTGGTGGAAGGCTTTTCTTTCCTACAGTAAATTCACAGTTAATTGGACCTGCCAGTACAGTTTCATCTCATTACACCGCCAGGCCCTATGTCTTTAGCCTTCCTGATGGTAGTGGTAATGCCGATGGTAAGAAATGGAGAGGGCAGGGTTTAGACCTTAATGCTGGGCCTGGAGGTCCAGACGTGGAGGGCAGAGATGAGAGCTCAGCTCTTTTGCAAAGGCAACTTCCTGTTGCCGGTTCACAGGCCCTAGCGGAGGAGCAGGTGAGGATGTTCCAGCTGGCTGGTGGCGTTCTCAAGAGGAAGGAACCAGGTGGTGGATGGGATAGCTACAAGCAATCCTCTTGGCAATAG 4878 0.4485 MIAGIGLDLGKCKAMHGRGGEEWKRTRHMWTSPTRGQPIVSAAPDVSSSSSPSINSFYKDGRKISVGDCALFKPPQKCPPFIGIIRSLTVGKECKLKILVNWLYRSAEVNLGKGLLLETVPNEVFYSFHTDEISAASLLHPCKVAFLPKGVELPSGTSSFVCRRVYDIANKCLWWLTDQDFINVLQEEVDQLLYRTRIEMHATVQPGGRSPKPMSSPTSSQLKSGSDSVQNSASFPSQAKGRKRERVDQGPESAKRERTTKVEDGDSGHSRQENILKAEIAKITEKGGLVNIEGVEKLVQLMVPDRNVKKIDLASRSMLAAVIAATDKLDCLSQFVQLKGLPVYDEWLQEVHKGKTGDGSGSKDGDKSVEEFLLVLLRALDKLPVNLQALQACNIGKSVNHLRTHKNSEIQKKARGLVDTWKKRVEAEMNINDAKAGSGQTVPWPTRTRLSDVGQGGNKNSGGSSDVAVKSLVTQLSASRTSPVKITQGENAARSASPGSMKSVPSPTSETINSKDGQARAATLSGVSEKSSSSSQSHNNSQSCSSDHAKTGGFSGKEDARSSTAMSVNKISGSSSRHRKSVNGISGSTPSGGQRESGRNSSVHKNSSSEKLSQSGLTEKAHDGTSLEGSTPKLIVKIPNRGRSPAESASGGSFDDPSIMNSRASSPVFSEKNDQYDHSSKEKVDFYRANNGADINTESWQSNDVKDVLTASDEGNGSPAAVTDEERCRTVGDSKKMVEASKAASSSSGNEHKAVNIQDASFSSINALIDSCVKYSETNASLSAVDDVGMKLLASVAAGEISKSELTTPTGSPEINTNAVEQSCPGNAMECEGKLVQNEYHANNGIDEHKKQDAVSGDSRANNDNDSGLLASEVKVPEEQNRHITSSSKDLQRVMEACPESKEKLSEISVAASLAGFPESTVQEARGSECSKQLKENKNGGNVNAGGDLDVKVNEFAREVEVDTIDKTSHPSVEVDLKGGNCTIEELSSGGQTAQKVPVVAMQDSVKGTDENVLHPFDVSVGRAVEDHSERDCRKTVNVAARSHSGQSEIQRNECKNDAMTTPENRSIVGLGFGDTCLASEHVEENSDTKEAQDQHGGHNLQSASLSLPSQEMEQHPGSKESKLTSTETEEAEECTSATADASSISAAGASDVMDSKLEFDLNEGFSADDGKSGEFNSIPVPGCAPAVRVISPVPFPVSTMSSGITASITVAAAAKGPFVPPEDLLKSKGQLGWKGSAATSAFRPAEPRKIVEMPLGTPAAAPISDATAGKQSRQLLDIDLNVPDERMLDDIASQRSSHQPADGVSPVRCTGGLGLDLNQVDEASDVGNCSISNGHKMDVQFLQVNPSSNALPNREASALRDFDLNDGPAVDEVITEPTLFTHQARSRLPSQTPASGPRTSSTELGSFSSWFPSTGNTYSAVTISSIMPDRGDQPFSIVAPNGPQRMLGPATGGSLFGPDVYRGPVLSSSAMPYPSAPYQYPVFPFNSSFPLPSSSFSGGSTTYVDSASGGRLFFPTVNSQLIGPASTVSSHYTARPYVFSLPDGSGNADGKKWRGQGLDLNAGPGGPDVEGRDESSALLQRQLPVAGSQALAEEQVRMFQLAGGVLKRKEPGGGWDSYKQSSWQ 1625
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele22g1784 1625 MobiDBLite consensus disorder prediction 32 53 - -
Lele22g1784 1625 Gene3D Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 293 429 IPR035441 -
Lele22g1784 1625 MobiDBLite consensus disorder prediction 1549 1575 - -
Lele22g1784 1625 MobiDBLite consensus disorder prediction 209 238 - -
Lele22g1784 1625 MobiDBLite consensus disorder prediction 203 273 - -
Lele22g1784 1625 Pfam TFIIS helical bundle-like domain 376 425 IPR017923 -
Lele22g1784 1625 MobiDBLite consensus disorder prediction 1040 1064 - -
Lele22g1784 1625 MobiDBLite consensus disorder prediction 1096 1115 - -
Lele22g1784 1625 MobiDBLite consensus disorder prediction 434 550 - -
Lele22g1784 1625 Pfam BAH domain 63 170 IPR001025 GO:0003682
Lele22g1784 1625 PANTHER BAH AND TFIIS DOMAIN-CONTAINING PROTEIN-RELATED 15 1625 - -
Lele22g1784 1625 Gene3D - 47 290 IPR043151 -
Lele22g1784 1625 SUPERFAMILY Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 330 439 IPR035441 -
Lele22g1784 1625 ProSiteProfiles TFIIS N-terminal domain profile. 349 428 IPR017923 -
Lele22g1784 1625 CDD TFIIS_I 359 426 - -
Lele22g1784 1625 MobiDBLite consensus disorder prediction 1082 1147 - -
Lele22g1784 1625 ProSiteProfiles BAH domain profile. 62 177 IPR001025 GO:0003682
Lele22g1784 1625 MobiDBLite consensus disorder prediction 1383 1408 - -
Lele22g1784 1625 MobiDBLite consensus disorder prediction 709 735 - -
Lele22g1784 1625 SMART TFS2_5 348 427 IPR003617 GO:0005634
Lele22g1784 1625 MobiDBLite consensus disorder prediction 557 625 - -
Lele22g1784 1625 SMART BAH_4 62 177 IPR001025 GO:0003682
Lele22g1784 1625 MobiDBLite consensus disorder prediction 654 673 - -
Lele22g1784 1625 MobiDBLite consensus disorder prediction 432 682 - -
Lele22g1784 1625 MobiDBLite consensus disorder prediction 1131 1147 - -
Lele22g1784 1625 MobiDBLite consensus disorder prediction 1116 1130 - -
Lele22g1784 1625 MobiDBLite consensus disorder prediction 239 273 - -
Lele22g1784 1625 MobiDBLite consensus disorder prediction 1038 1067 - -
Lele22g1784 1625 MobiDBLite consensus disorder prediction 850 871 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele22g1784 Lele-ChrLele22 23021594 23029941 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR IWS1 Lele22g1784 BAH 8.1e-08 No_clan