Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele22g1779 ATGCCGTCCGTTTGCTTCACTCTCTTCTCCGTTTTTCTCATCGCCACCCTTCCCAACTTTCAGGGATATGCTGCAAGTGATCTTCACATCAGATCGCAGTCGCCGTTCTCCGTCGCTCTTGAAACCCTCCAGAAGCAATTAGGCTATACCTTCAAGAGCATTGGCCTACTTCGTCGTGCCATGACTCATGCTTCCTTCTCAGAAGAGAACAACAGAGCTTTGAGCATTCTGGGTGCCAATGTCATCGAAACAGCTGTCTCTTTCCAGTCACTTTCAAAAGACATTGACATCTCTTCGAAAGATCTGAATCGTAGAATAGCGGAACTCTCCAACGTGGAATCTTCATGCACTGGAGATGCATTGCGGTTGGGTTTGCAAAAGGTAGTTCGAGTTTCACCCAAGACCAATTCTTCTGCACCTTCTGTGGTTTGTGGTGCATTCCGTGCAATCTTTGGTGCTATTGCTATTGATACCGCAAACTGCGATACTGCAGGCAACGTTTTCTGGGCCGTTCACGGAGGTAAGGTCGGGGTTGCTCTGCCATTTTGA 549 0.4809 MPSVCFTLFSVFLIATLPNFQGYAASDLHIRSQSPFSVALETLQKQLGYTFKSIGLLRRAMTHASFSEENNRALSILGANVIETAVSFQSLSKDIDISSKDLNRRIAELSNVESSCTGDALRLGLQKVVRVSPKTNSSAPSVVCGAFRAIFGAIAIDTANCDTAGNVFWAVHGGKVGVALPF 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele22g1779 182 ProSiteProfiles Ribonuclease III family domain profile. 40 159 IPR000999 GO:0004525|GO:0006396
Lele22g1779 182 Gene3D Ribonuclease III domain 38 173 IPR036389 GO:0004525|GO:0006396
Lele22g1779 182 PANTHER RIBONUCLEASE III 32 160 IPR011907 GO:0003723|GO:0004525|GO:0006364
Lele22g1779 182 Pfam Ribonuclease-III-like 56 158 IPR000999 GO:0004525|GO:0006396
Lele22g1779 182 SMART riboneu5 55 181 IPR000999 GO:0004525|GO:0006396
Lele22g1779 182 SUPERFAMILY RNase III domain-like 34 171 IPR036389 GO:0004525|GO:0006396
Lele22g1779 182 FunFam Protein NUCLEAR FUSION DEFECTIVE 2 38 174 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele22g1779 Lele-ChrLele22 22991596 22992400 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele22g1779 22 22991596 22992400 Lele22g1779 22 22991596 22992400 ECH
Lele22g1779 22 22991596 22992400 Lele23g0205 23 1355113 1359851 hybridization
Lele22g1779 22 22991596 22992400 Lele24g1738 24 22635085 22640197 hybridization