Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele22g1778 ATGCCATACGAGGAGGGCATTTGTGTAAAAAAGCTTAAGTTGATTAGGATCAGAGCTGAAAACCATCCTTCGTTGAATCTACAAAAATTTGAACAAAACCAACGCTCAAAGCAAACGGAAACTCGGAAACAATATTCCCATCGTATTCTTTTCGCCTCTCTAATTCTTGAGGTCGGCTTCGAATCCATGAAACTCCCACAAATCTCACCGGTTGTCAACCTGACACACTCGTCGCATATATCCAAGTATACCATCTTTCCACTTAAATTAGGAAATCTATGTACAGTCACTGGAAATTCTTGGTGTTGCATCTGTTTGATTCATTTCAGCAGGAAATTTATGTACAGCCATTGGAAATTCTTAGTGTTGCATCAGTTTGACTCCTTTGAAGAAAAGTTCCCAAGGATAACACTCTTTTCTTCACGAGCTCTATATGACAAGCCAAGGATAAACCGCGTGAAGGGCTAGCATTATAGTGCATGTGTGGCATTGGATGACTCAAGGATCAAGTATAACCGGACCGGCGAAACCCTTGTAAGAATGGTGGCTACATCTTGCACAAATTTGTTGGACTTGGTGTCTGGGGACATTTTAAATTTCCCTCAAACACCAAGAGCTCTTCCGCGAGTTAATACTGTTCCTGGAGTTATTTCTGACATAGATGGGAAAAAAGGTGCTGGTGTTGATGATTCACATGCTTACTCATCAGAACATCGTCAAAAGATAATCATTGTAGCAAATTTTCTTCCCCTTAATGCTCATAAGGACAAAGATTCAGGCAGATGGTGCTTCTGCTATGATGAAGATTCGATCTTGTGGCAGATAAAAGATGCTATTTCTTGTGATACCGATGTTGTTTACGTAGGATCTTTGAAGGTTGATGTTGATGAAAGTGAACAAGAGAGAGTTTCTCAAGAGTTGCTAGATGAATTCAAATGCTGGCCTACCTTCCTTCCACCGCTCATTCAGAATAGGTTTTATAATGGATTTTGCAAGCAACATTTGTGGCCACTATTTCATTACATGTTACCCATGTTTCCCAATCATGGTAATCGCTTTGATAGGTTGCTCTGGCAGGCTTATGTTGCTGCTAACAGGATATTTTCAAAAAGGGTTTTGGAAGTTGTGAATCCAGAAGTTGATTATGTATGGGTTCATGATTATCATCTGATGGTTCTCCCAACATTTCTCCGAAAAGAATACAGTAAAGTCAAGCTAGGATTTTTCCTCCATAGCCCTTTTCCTTCTTCTGAAATTTATAGGACCCTGCCTGTCAGAGATGAAATTTTGAAAGCACTTCTCAATGCGGATTTAATTGGCTTTCATACATTTGATTATGCTCGTCATTTCTTATCTTGTTGTAGTCGAATGCTTGGCTTGGAATATGAATCCAAAAGGGGCCACATTGGACTTGATTACTATGGCCGCACAGTATACATTAAAATCTTGCCAGTAGGAATTCACATGGCCAGGCTTCAATCTACCATAAATCACCCATCTTCTACTGACAAAGTTCAAGAACTTTGTGAGCAATTTATGGGGAAGCAACTTATTCTTGGTGTTGACGATATGGATATCTTTAAAGGAGTCAGTTTGAAGCTCTTGGCTGTAGAATTACTCCTAGAGCAGAATCCAGAACTTCTAGGTGAATTAGTACTAGTCCAAATTGTAAATCCCCCAAAAAGTTCAGGCAAAGATGTTGAGGAAGCAAAGAAGGAGATACACATGATTGCTAACAGGATAAATGAAAGGTTCAGTTGGCTAAATTATGAACCTGTGATCATCATAGATCATCCTGTTCCTTTCTATGAGAAGATAGCCTATTATTCCTTGGCAGAATGTTGCATCGTGAATGCTGTACGCGATGGTATGAATTTAATTCCATACGAGTATATCGTCTGTAGGCAGGGGAATACGCAAATGGATCAAGCCTTGGGAATTGTTTCAGAGCTCCCTTCTACAAGTCCACTTGTTGTTTCTGAGTTTATCGGTTGCTCACCATCTCTTAGTGGGGCATTGAGGGTGAACCCATGGGACATTAGTGCTGTAGCTGATGCGATAAATTTGGCCATCAGCATGTCTATTGTGGAGAAACAGTTACGGCATGAGAAGCACTATCGGTATGTTAGCTCTCATGACATGGGTTATTGGGCTCGAAGTTTTGTACAAGATCTAGTTCGTTCATGCCAGGATCATCTCAGCAAACGTTGTTGGGGTATTGGCTTTGGACTGAGTTTCAGAATCCTGGCCCTTTCACCGAGTTTTAGGAAGCTTTCAATGGGCCACATTGTCTCTGCATATAAAAGGTCAAATCAGATGGCAATTTTTCTGGACTATGATGGTACCCTTGTGTCCCAAACTTCCATTGTTAAAAGTCCCAGTCCTGAAGTCATATCTTTGCTGAACAACCTATGCAGTGACCCCAACAACATTGTGTTTATAGTTAGTGGCAGGGGAAGGACTTCTTTGGGTGAGTGGTTAAATCAGTGCGAGAACCTCGGTATCGCAGCGGAGCACGGTTATTTTATCAGGTGGGATGGACAGTCAAGTTGGGAAACCAATCATGTAGCTACAGATTTTGCTTGGAAAAGCATTGTTGAACCTGTAATGAGAGCATATACTGAGTCAACCGATGGCTCTCAAATGGAGATCAAGGAGAGCGCCTTGGTTTGGCACCACCGTGATGCTGATCTTGATTTCGGATCTTGGCAGGCCAAGTCGCTGCTGGATCACCTTGAAAATGTCCTTTCAAATGATCCAGTTGTTGTTAAGAAGGGACAGTACATTGTTGAAGTTAAACCACAGGGAATCACTAAAGGGTTAGTTGTAGAAGAGGTTCTGTCTAGACTGACCCGGACCGGGAAATCACCCGATTTCATTCTGTGCATTGGGGATGATAGGTCTGACGAGGACATGTTTGCGAGCATATCCACCAAAGTATATGGCGGAAGCTCATCTTCGGCACCAGAAATCTTTGCTTGCACAGTTGGCCAGAAACCAAGCAAAGCCAGGTACTACGTGGACGATACTGCTGAGGTGATGATGTTGCTTAAAAGCCTTGGTACTGCTTCAAGGTTTAAACCAGTATGTGATGAGGAGGAAGAAGTTCCTGAGTAG 3117 0.4187 MPYEEGICVKKLKLIRIRAENHPSLNLQKFEQNQRSKQTETRKQYSHRILFASLILEVGFESMKLPQISPVVNLTHSSHISKYTIFPLKLGNLCTVTGNSWCCICLIHFSRKFMYSHWKFLVLHQFDSFEEKFPRITLFSSRALYDKPRINRVKGXHYSACVALDDSRIKYNRTGETLVRMVATSCTNLLDLVSGDILNFPQTPRALPRVNTVPGVISDIDGKKGAGVDDSHAYSSEHRQKIIIVANFLPLNAHKDKDSGRWCFCYDEDSILWQIKDAISCDTDVVYVGSLKVDVDESEQERVSQELLDEFKCWPTFLPPLIQNRFYNGFCKQHLWPLFHYMLPMFPNHGNRFDRLLWQAYVAANRIFSKRVLEVVNPEVDYVWVHDYHLMVLPTFLRKEYSKVKLGFFLHSPFPSSEIYRTLPVRDEILKALLNADLIGFHTFDYARHFLSCCSRMLGLEYESKRGHIGLDYYGRTVYIKILPVGIHMARLQSTINHPSSTDKVQELCEQFMGKQLILGVDDMDIFKGVSLKLLAVELLLEQNPELLGELVLVQIVNPPKSSGKDVEEAKKEIHMIANRINERFSWLNYEPVIIIDHPVPFYEKIAYYSLAECCIVNAVRDGMNLIPYEYIVCRQGNTQMDQALGIVSELPSTSPLVVSEFIGCSPSLSGALRVNPWDISAVADAINLAISMSIVEKQLRHEKHYRYVSSHDMGYWARSFVQDLVRSCQDHLSKRCWGIGFGLSFRILALSPSFRKLSMGHIVSAYKRSNQMAIFLDYDGTLVSQTSIVKSPSPEVISLLNNLCSDPNNIVFIVSGRGRTSLGEWLNQCENLGIAAEHGYFIRWDGQSSWETNHVATDFAWKSIVEPVMRAYTESTDGSQMEIKESALVWHHRDADLDFGSWQAKSLLDHLENVLSNDPVVVKKGQYIVEVKPQGITKGLVVEEVLSRLTRTGKSPDFILCIGDDRSDEDMFASISTKVYGGSSSSAPEIFACTVGQKPSKARYYVDDTAEVMMLLKSLGTASRFKPVCDEEEEVPE 1038
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele22g1778 1038 Gene3D Glycogen Phosphorylase B; 495 710 - -
Lele22g1778 1038 TIGRFAM T6PP: trehalose-phosphatase 771 1020 IPR003337 GO:0003824|GO:0005992
Lele22g1778 1038 CDD HAD_TPP 774 1015 - -
Lele22g1778 1038 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 772 889 - -
Lele22g1778 1038 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 241 728 - -
Lele22g1778 1038 Pfam Glycosyltransferase family 20 241 725 IPR001830 GO:0003824|GO:0005992
Lele22g1778 1038 SUPERFAMILY HAD-like 774 1021 IPR036412 -
Lele22g1778 1038 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 234 493 - -
Lele22g1778 1038 Gene3D - 773 890 IPR023214 -
Lele22g1778 1038 Gene3D - 899 1029 IPR023214 -
Lele22g1778 1038 CDD GT20_TPS 241 725 IPR001830 GO:0003824|GO:0005992
Lele22g1778 1038 TIGRFAM HAD-SF-IIB: HAD hydrolase, family IIB 774 976 IPR006379 -
Lele22g1778 1038 Gene3D Glycogen Phosphorylase B; 232 494 - -
Lele22g1778 1038 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 208 1021 IPR001830 GO:0003824|GO:0005992
Lele22g1778 1038 FunFam Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 902 1033 - -
Lele22g1778 1038 Pfam Trehalose-phosphatase 776 1010 IPR003337 GO:0003824|GO:0005992
Lele22g1778 1038 FunFam Alpha,alpha-trehalose-phosphate synthase 495 710 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele22g1778 Lele-ChrLele22 22984403 22990210 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele22g1778 181 1024 Trehalose Biosynthesis Gene Families AT1G23870 66.114 0.0 1215