Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele22g1757 ATGCAGAGCACAGCTGTCACTCTCTCCCCTTCGCTTACCCTTCACAAACCTCGCAGACCTTTTACCTCCAATCGCTTCCATTCTACACATTTCTCTCTATCCGCTTCCTCTTCCAAGCCCAGTGAAAGCTCCTCGTCGTTCCATCGCCGATATTGGTCCGTTGCTCCTTCTTCTTCTTCTTCCTCCTCCTCCTCTTTTAAGTTCAGGCCCTCGACATCTCTGCTCCCTCCTGCTTCCTCTGATTCTGATGCCACTCGCTTTGAGGCCCGGGCCAGTTCTGTGCCTGAGAGCGCGGATGAGAGTTCCAACGCCTTATTCAAAACTCTGCAGCTTGGATCCTTGTTTGGCCTCTGGTACCTCTTCAATATATACTTTAATATCTACAATAAGCAGGTCTTGAAGGTGTACCAGTTTCCAGTAACTGTCACTGCAATTCAATTTACTGTTGGGACTGTCCTTGTCTTATTTTTATGGACTTTTAATCTCCATAAAAGGCCTAAAATAAGTGGTTCCCTGCTTGCAGCTATACTGCCTTTAGCTGTGGTACATACTTTAGGGAACCTTTTCACTAACATGAGCCTTGGAAAGGTAGCCGTGTCGTTCACTCATACTATCAAAGCAATGGAGCCTTTCTTTTCTGTGGTCCTCTCTGCCATATTCCTTGGAGAGATGCCAACTGCGTTGGTGGTCGCTTCACTTTTGCCTATTGTTGGTGGAGTGGCACTGGCATCTATCACTGAGGCCTCGTTTAATTGGGCTGGATTTGGGAGTGCAATGGCATCTAATTTGACATTTCAGTCTCGTAATGTTCTTAGCAAGAAGGTCATGGTTAATAAAGAGGAAACAATGGACAATATAAACCTCTTCTCAACAATAACTGTCATGTCCTTCTTTTTGTTAGCACCTGTGGCTATCTTCAAGGAAGGCGTCAAATTTACCCCTGCATACCTTCAATCTGCTGGGTTAAATGTTAAACAATTATACACCAGATCTCTTATTGCGGCACTCTGTTTCCATGCATATCAACAAGTTTCTTATATGATATTGCAGAGAGTATCACCGGTTACCCACTCTGTAGGCAACTGCGTGAAGCGGGTTGTGGTCATTGTGAGCTCTGTCCTCTTCTTCAAAACACCAGTATCACCTGTTAACGCTTTAGGCACTGGTATAGCTCTGGCCGGAGTGTTCCTTTATTCGAGAGCAAAGCGAATTAAGCCAAAGACAGCTTAA 1230 0.4512 MQSTAVTLSPSLTLHKPRRPFTSNRFHSTHFSLSASSSKPSESSSSFHRRYWSVAPSSSSSSSSSFKFRPSTSLLPPASSDSDATRFEARASSVPESADESSNALFKTLQLGSLFGLWYLFNIYFNIYNKQVLKVYQFPVTVTAIQFTVGTVLVLFLWTFNLHKRPKISGSLLAAILPLAVVHTLGNLFTNMSLGKVAVSFTHTIKAMEPFFSVVLSAIFLGEMPTALVVASLLPIVGGVALASITEASFNWAGFGSAMASNLTFQSRNVLSKKVMVNKEETMDNINLFSTITVMSFFLLAPVAIFKEGVKFTPAYLQSAGLNVKQLYTRSLIAALCFHAYQQVSYMILQRVSPVTHSVGNCVKRVVVIVSSVLFFKTPVSPVNALGTGIALAGVFLYSRAKRIKPKTA 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele22g1757 409 MobiDBLite consensus disorder prediction 1 21 - -
Lele22g1757 409 PANTHER SOLUTE CARRIER FAMILY 35 110 403 - -
Lele22g1757 409 Pfam Triose-phosphate Transporter family 109 399 IPR004853 -
Lele22g1757 409 SUPERFAMILY Multidrug resistance efflux transporter EmrE 154 245 - -
Lele22g1757 409 TIGRFAM tpt: Tpt phosphate/phosphoenolpyruvate translocator 109 407 IPR004696 GO:0016020|GO:0022857|GO:0055085
Lele22g1757 409 SUPERFAMILY Multidrug resistance efflux transporter EmrE 323 403 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele22g1757 Lele-ChrLele22 22830211 22833329 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele22g1757 1 407 Antiporters AT5G33320 68.281 0.0 518
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele17g1060 17 21145261 21148227 Lele22g1757 22 22830211 22833329 CCT
Lele18g0479 18 2816016 2818970 Lele22g1757 22 22830211 22833329 CCT
Lele19g0499 19 2857250 2860216 Lele22g1757 22 22830211 22833329 CCT
Lele20g0957 20 15676852 15679818 Lele22g1757 22 22830211 22833329 CCT
Lele21g1781 21 25490478 25493579 Lele22g1757 22 22830211 22833329 ECH
Lele22g1757 22 22830211 22833329 Lele22g1757 22 22830211 22833329 ECH
Lele22g1757 22 22830211 22833329 Lele23g0226 23 1550192 1557436 hybridization