Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele22g1749 ATGACAATACCGAGAAGACCGAACGCTCAGTGCTGTGTTTTGACGGTCGTCGCCTTGCTTCACTTCACAGACGAAACCTCCGACTGTGATTCGACACGACAGACTTTTTTGTTCGCTCTTTCTTCGCTTTCTCACTCATTATTATCACGTACTGGATCATCCGGGGATGGCATTAGTAGGGAAGAGAAAGAAGAAAACGAGTCGAAGAGAATCACTGAGGATCGAGAGTTGAAGGACAAACTTCTTCGTAGATATAGTGGATGTATTATTGGTCTAAGGCATGAATTTTCTAAAAAGAAAAAGAAAGAGAAGCTACCCAAAGAAGCGAGACAAATATTGCTTGCATGGTGGAATATTCACTTCAAATGGCCATACCCAACGGAAGCGGATAAGGTTGCATTAGCTGAATGGACAGGTCTGGATCAAAAGCAGATAAGCAATTGGTTTATAAACCAAAGGAAGCGCCATTGGAAGCCAACAGAGGAAATGCAAGCAGCAGTTTTGGATGGCCCTAATGGACCTTTTTCCACCAGTGATTGA 540 0.4333 MTIPRRPNAQCCVLTVVALLHFTDETSDCDSTRQTFLFALSSLSHSLLSRTGSSGDGISREEKEENESKRITEDRELKDKLLRRYSGCIIGLRHEFSKKKKKEKLPKEARQILLAWWNIHFKWPYPTEADKVALAEWTGLDQKQISNWFINQRKRHWKPTEEMQAAVLDGPNGPFSTSD 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele22g1749 179 Pfam Homeobox KN domain 116 155 IPR008422 GO:0003677|GO:0006355
Lele22g1749 179 ProSiteProfiles ELK domain profile. 76 96 IPR005539 GO:0003677
Lele22g1749 179 SMART HOX_1 98 163 IPR001356 GO:0003677
Lele22g1749 179 MobiDBLite consensus disorder prediction 47 72 - -
Lele22g1749 179 MobiDBLite consensus disorder prediction 56 72 - -
Lele22g1749 179 Pfam ELK domain 76 97 IPR005539 GO:0003677
Lele22g1749 179 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 40 165 - -
Lele22g1749 179 CDD homeodomain 110 159 IPR001356 GO:0003677
Lele22g1749 179 SMART ELK_2 76 97 IPR005539 GO:0003677
Lele22g1749 179 SUPERFAMILY Homeodomain-like 97 172 IPR009057 -
Lele22g1749 179 ProSitePatterns 'Homeobox' domain signature. 134 157 IPR017970 GO:0000981|GO:0006355
Lele22g1749 179 Gene3D - 94 168 - -
Lele22g1749 179 ProSiteProfiles 'Homeobox' domain profile. 96 159 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele22g1749 Lele-ChrLele22 22782734 22784073 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele22g1749 40 177 Homeobox Transcription Factor Family AT1G23380 54.795 4.63e-46 152
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-other Lele22g1749 Homeobox_KN 3.5e-16 CL0123