Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele22g1742 ATGGATGGCCTCAAGGCCCGGTCACATGTTATTGTTATAGGAGCTACCAATAGACCCAATAGCATTGATCCTGTCTTGAGGAGATTTGGGAGATTGGATCGGGAGATTGACATTGGTGTACCAGATGAAGTTGGAAGACTGGAGGTTGATCTTGAAAGAGTTGCTAGAGATACCCATGGATATGTTGGTGCAGATCTTGCTGCTCTTTGCACAGATGCTGCACTACAGTGTATTCGGGAGAAAATGGATGTCATTGACTTAGAGGATGAAACAATTGGTGCTGAGGTGTTGAATTCCATGGCTGTGACAAATGATCACTTCCAAACTGCTTTAGGTGCTTCAAATCCATCAGCTTTGTGTGAAACAGTTGTGGAGGTTACCAACGTTTCCTGGGACGATATTGGGGACTTGGAGAATGTTAAAAGGGAGCTTCAAGAGCGTGGCAGTTCCACAGGAGGTGCTGGAGGTGCTGCAGATAGGGTTTTGAACCAATTATTAACAGAAATGGATGGAATGACAGCTAAGAAAACAGTTTTCATTATTGGCGCAACAAACAGGCCTGACATTATAGACCCTGCATTGCTCAGGCCCGGACGTCTGGACCAACTGATTTATATCCCATTGCCAGATGAGAATTCACGCTTTCAAATCTTCAAAGCATGTTTGAGAAAGTCACCATTATCGAAGGATGTTGACCTAGCAACACTCGCCCTTTTTACTCATGGATTCAGCGGTGCTGACATTACAGAAATTGTCAGAGAGCCTGCAAATATGCCATCAGAGAAGATATTGAGAAGGTATGATATGATACTTGATGTGCAGACACTGAATTCAAAAGAGTTCAGTTTTGTATTATGTGTCTAA 864 0.4329 MDGLKARSHVIVIGATNRPNSIDPVLRRFGRLDREIDIGVPDEVGRLEVDLERVARDTHGYVGADLAALCTDAALQCIREKMDVIDLEDETIGAEVLNSMAVTNDHFQTALGASNPSALCETVVEVTNVSWDDIGDLENVKRELQERGSSTGGAGGAADRVLNQLLTEMDGMTAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDENSRFQIFKACLRKSPLSKDVDLATLALFTHGFSGADITEIVREPANMPSEKILRRYDMILDVQTLNSKEFSFVLCV 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele22g1742 287 CDD AAA 1 39 - -
Lele22g1742 287 Gene3D - 1 37 IPR027417 -
Lele22g1742 287 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 116 IPR027417 -
Lele22g1742 287 CDD AAA 159 208 - -
Lele22g1742 287 Pfam ATPase family associated with various cellular activities (AAA) 1 39 IPR003959 GO:0005524|GO:0016887
Lele22g1742 287 Pfam ATPase family associated with various cellular activities (AAA) 151 208 IPR003959 GO:0005524|GO:0016887
Lele22g1742 287 PANTHER AAA-FAMILY ATPASE 147 254 - -
Lele22g1742 287 FunFam Bromodomain protein 1 40 - -
Lele22g1742 287 Pfam AAA+ lid domain 230 254 IPR041569 -
Lele22g1742 287 Pfam AAA+ lid domain 49 90 IPR041569 -
Lele22g1742 287 Gene3D - 38 121 - -
Lele22g1742 287 Gene3D - 209 266 - -
Lele22g1742 287 Gene3D - 152 208 IPR027417 -
Lele22g1742 287 FunFam Cell division cycle protein 48 homologue 44 118 - -
Lele22g1742 287 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 59 255 IPR027417 -
Lele22g1742 287 ProSitePatterns AAA-protein family signature. 178 196 IPR003960 GO:0005524|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele22g1742 Lele-ChrLele22 22752635 22754362 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele22g1742 1 96 Calmodulin-binding Proteins AT3G56690 34.545 4.27e-13 67.8