Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele22g1740 ATGACTTGCGACGGAGGAGAGCTTAGTGAGGACGGCGCACAGAGAACTAGAGCAAGGACAGGACTAAAGAAGAAGGCACAGCCCACAAGACATGATTTGGTTCCTTCTCGTTGTTCCTCCTCCCTAGGCTCAAACCTCTCTCTCATTGGAGTTCGTAGCAGCAGCATACTTGTTGTAATGCCTGAAAATCCATGGACGACCCTCTTCTTCCTAGTAACTGCCCTTTTACTTCATTCCCAATATTCTTTTATTGCTTCTTCTGCTGCTGTTAACCCACAAGGGCAAGCTCTTCTTTCATGGAAGACAACATCCCTGAACGGGTCCTTGGTGGTTCTGAGTAATTGGGACGCGATCGACGAAACTCCATGTGGTTGGTTTGGAGTTAGCTGCAACTTGAAGAACGAGGTTGTGCAATTAGATCTGAGGTATGTTGATTTGCTTGGAAGCCTTCCTTATAATTTCACCTCATTGAGTTCCTTGATCAAGCTTATCCTTATTGGAACGAACCTCACTGGTTCTATCCCAAAAGAGATAGGCTTTCTTAGCAATCTCACCTACTTGGATTTGAGTGACAATGCCTTGACTGGTGAGATCCCAAGTGAGCTTTGCTTTTTGCCTCAGCTTCAAGAACTTCATCTCAACTCAAACCAGCTTGAAGGTTCGATTCCAATTGCAATTGGGAATCTCGCAAAGTTGGAGTGGTTGATCTTATATGATAATCAGCTAAGTGGTGAAATTCCCACAACGATTGGAAATCTGAAGAATCTGCAAGTGATTCGAGCAGGTGGAAACAAGAACCTTGAAGGCGCTTTGCCTCAAGAAATAGGAAACTGTACAAAATTGGTCATGTTGGGTTTAGCTGAAACAAGTATCTCAGGATTTCTTCCTCGAACTCTTGGCCTCCTCAAGAAGCTGAACACTATTGCACTTTACACTTCCCTCCTCTCTGGCCAGATTCCTGCTGAACTCGGTGACTGCACTGAACTTGAGAACATTTATTTGTACGAGAATTCCCTTACCGGATCATTACCTAGCAGATTGGGAAATCTTAGGAATCTCAAGAATCTTCTTTTATGGCAGAACAGTTTAGTTGGCACCATCCCGCCAGAAATTGGAAATTGCTACCAGTTATCTGTCATTGACATCTCAATGAACTCGCTTACAGGAAGCATTCCCAAGAGTTTTGGAAATCTGACGGCTTTGGAAGAACTTCAGCTTAGCGAAAACCAGATTTCAGGGGAGATTCCTGCAGAGCTAGGGAACTGCAAGCAACTCACTCACATCGAGCTGGACAACAATCAAATCACGGGGACGATACCTTCTGAATTCGGAAACCTTAGTAATCTGACGTTGTTGTTCCTGTGGCATAACAAGCTAGAAGGAAATACACCGTCTTCACTCTCCAATTGCCAAAACCTCGAGGCTGTAGATCTGTCACAGAATGCGCTCACGGGTCCCATACCCAAGGGGATATTCGAGCTCAAGAATCTCAACAAGCTCTTGCTACTTTCTAATAATCTCTCCGGAAGTATTCCATCTGAAATTGGAAATTGTTCGTCTTTGATTCGGTTCCGAGTGAGCAAAAATAAGATCACAGGGAGCATACCCCCACAGATTGGGAATCTGAGAAACTTGAACTTTTTGGATCTTGGATACAACCGGATGTCCGGAGTTATTCCGGAAGAGATGTCAGGATGCAGGAATCTCACGTTTTTGGACCTACATTCCAATATGATAGCCGGGAGCTTGCCGGAGAGTCTGAGTGAGCTTGTGTCGCTTCAATTTATCGACTTCTCCGATAACATGATCGAAGGTACGCTGAGCCCGAGACTAGGATCGCTTGGTTCACTCACAAAACTGATTCTGGGAAAGAATCATATCTCTGGATCAATTCCGAGTCAACTCGGTTCCTGTTCAAAGCTTCAGTTGCTGGATCTTAGTAGCAACAATTTCTCCGGTAATATCCCCGGTAGTCTCGGTAATATCCCGGCGCTTGAAATTGCACTGAATCTGAGCTTGAATAAACTTTCCGGCGAGATTCCTCAGGAGTTTTCTGCCTTGGTTAAGGTGGGGATCTTAGACATTTCCCACAACGAGCTCACCGGCAACCTTCATTATCTCGCGGACCTCCAAAATCTCGTCGTCCTCAATATCTCATACAACAAATTCTCTGGGCGCATCCCGGACACGCCTTTCTTCGCAAAGCTTCCTCTAAATATGCTCGCCGGCAACCCATCGCTCTGTCTCTCCGTAAACCGATGCGCCGAAGACGATTCTGGAAGCTATTCAGGAAGGCGTGCGAAGACGGCGCGTATAGCTATGGTGGTTCTACTTTGCACTGCATGTGCTCTGCTCTTGGCGGCGCTGTACGTCGTCGTAGCGGCCAAACGACGACAGAGGGGCCACGGTAACGATCTCGACCTCGACGGGAGGGATAGCGACCTAGAGATGGGCCCACCTTGGGAGGTGACAGTGTACCAGAAGCTGGACCTCTCAATTTCTGACGTGGCAAAGTGTCTGACCGCTGGAAACGTCATCGGGCGGGGACGATCCGGGGTGGTTTACAGAGTGGACATACCAGCGGGAATAGAAATGGCAGTGAAGAGGCTCTTGTCGTCGGAGAAATTCTCGGCGGCGGCGTTCTCGTCGGAGATAACGACACTGGGGAGAATACGACACCGTAACATCGTGAGGCTATTGGGTTGGGCGGCGAACCAGAAGACGAAGTTACTGTTTTATGATTATTTACCAAACGGTAATCTGGATACGCTTTTGCACGAAGGGCGCACAGGATTGATAGAGTGGGAGACACGATTCAAGGTAGCGCTGGGAGTGGCGGAAGGCTTAGCTTACTTGCATCATGACTGTGTGCCTGCCATCTTGCACCGGGACGTAAAAGCGCACAACATTTTGTTAGGAGACAGTTACGAGCCGTGTCTCGCAGATTTTGGTTTTGCAAGATTGGTACAGGAAGACCAAGCTTCCTTCTCCGTCAATCCACAGTTCGCTGGTTCTTACGGCTACATTGCGCCGGAGTATGGGTGCATGTTGAAGATAACAGAGAAGAGCGACGTGTATAGCTATGGAGTGGTGCTGCTAGAGATAATAACAGGGAAACGACCGGTGGACGCTTCGTTTGGTGAGGGGCTACATGTGATAGATTGGGTGAGCGATCATCTGAAGAAGAAGAAGGACCCTGTGGAGATTGTGGATCCTAAGCTTCAAGGCCACACTGACACGCACGTTCAAGAGATGCTCCAAGCACTCGGCATCTCCCTCCTCTGTACCAGCAGTCGTCCCGACGATCGTCCCACCATGAAAGACGTCGCCGCCTTGCTCCGTGAAATCCGCCACGACCCTCCGGCAGGCCACGACGCTCACAAGCCCAAACCCACCACCACCACCAACTCTTCTTCTTCATCCTCTGTCACTCCCACTCAGTTGTTGCTTCTTGATCATCCTTCGTCTCATTCTTCATCGCTTGCTTATTCGTCTTCTACTGTACAAGGAAGGAGTGCGTGA 3522 0.4821 MTCDGGELSEDGAQRTRARTGLKKKAQPTRHDLVPSRCSSSLGSNLSLIGVRSSSILVVMPENPWTTLFFLVTALLLHSQYSFIASSAAVNPQGQALLSWKTTSLNGSLVVLSNWDAIDETPCGWFGVSCNLKNEVVQLDLRYVDLLGSLPYNFTSLSSLIKLILIGTNLTGSIPKEIGFLSNLTYLDLSDNALTGEIPSELCFLPQLQELHLNSNQLEGSIPIAIGNLAKLEWLILYDNQLSGEIPTTIGNLKNLQVIRAGGNKNLEGALPQEIGNCTKLVMLGLAETSISGFLPRTLGLLKKLNTIALYTSLLSGQIPAELGDCTELENIYLYENSLTGSLPSRLGNLRNLKNLLLWQNSLVGTIPPEIGNCYQLSVIDISMNSLTGSIPKSFGNLTALEELQLSENQISGEIPAELGNCKQLTHIELDNNQITGTIPSEFGNLSNLTLLFLWHNKLEGNTPSSLSNCQNLEAVDLSQNALTGPIPKGIFELKNLNKLLLLSNNLSGSIPSEIGNCSSLIRFRVSKNKITGSIPPQIGNLRNLNFLDLGYNRMSGVIPEEMSGCRNLTFLDLHSNMIAGSLPESLSELVSLQFIDFSDNMIEGTLSPRLGSLGSLTKLILGKNHISGSIPSQLGSCSKLQLLDLSSNNFSGNIPGSLGNIPALEIALNLSLNKLSGEIPQEFSALVKVGILDISHNELTGNLHYLADLQNLVVLNISYNKFSGRIPDTPFFAKLPLNMLAGNPSLCLSVNRCAEDDSGSYSGRRAKTARIAMVVLLCTACALLLAALYVVVAAKRRQRGHGNDLDLDGRDSDLEMGPPWEVTVYQKLDLSISDVAKCLTAGNVIGRGRSGVVYRVDIPAGIEMAVKRLLSSEKFSAAAFSSEITTLGRIRHRNIVRLLGWAANQKTKLLFYDYLPNGNLDTLLHEGRTGLIEWETRFKVALGVAEGLAYLHHDCVPAILHRDVKAHNILLGDSYEPCLADFGFARLVQEDQASFSVNPQFAGSYGYIAPEYGCMLKITEKSDVYSYGVVLLEIITGKRPVDASFGEGLHVIDWVSDHLKKKKDPVEIVDPKLQGHTDTHVQEMLQALGISLLCTSSRPDDRPTMKDVAALLREIRHDPPAGHDAHKPKPTTTTNSSSSSSVTPTQLLLLDHPSSHSSSLAYSSSTVQGRSA 1173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele22g1740 1173 ProSiteProfiles Leucine-rich repeat profile. 183 206 IPR001611 GO:0005515
Lele22g1740 1173 MobiDBLite consensus disorder prediction 1119 1173 - -
Lele22g1740 1173 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 579 655 - -
Lele22g1740 1173 Gene3D Ribonuclease Inhibitor 304 375 IPR032675 -
Lele22g1740 1173 Gene3D Ribonuclease Inhibitor 92 200 IPR032675 -
Lele22g1740 1173 ProSitePatterns Serine/Threonine protein kinases active-site signature. 960 972 IPR008271 GO:0004672|GO:0006468
Lele22g1740 1173 SMART LRR_typ_2 229 253 IPR003591 -
Lele22g1740 1173 SMART LRR_typ_2 542 566 IPR003591 -
Lele22g1740 1173 SMART LRR_typ_2 710 743 IPR003591 -
Lele22g1740 1173 SMART LRR_typ_2 181 203 IPR003591 -
Lele22g1740 1173 SMART LRR_typ_2 494 518 IPR003591 -
Lele22g1740 1173 SMART LRR_typ_2 614 638 IPR003591 -
Lele22g1740 1173 SMART LRR_typ_2 446 469 IPR003591 -
Lele22g1740 1173 SMART LRR_typ_2 567 590 IPR003591 -
Lele22g1740 1173 SMART LRR_typ_2 398 422 IPR003591 -
Lele22g1740 1173 SMART LRR_typ_2 205 228 IPR003591 -
Lele22g1740 1173 SMART LRR_typ_2 350 374 IPR003591 -
Lele22g1740 1173 MobiDBLite consensus disorder prediction 1 38 - -
Lele22g1740 1173 ProSitePatterns Protein kinases ATP-binding region signature. 846 868 IPR017441 GO:0005524
Lele22g1740 1173 Gene3D Phosphorylase Kinase; domain 1 824 915 - -
Lele22g1740 1173 Pfam Leucine rich repeat N-terminal domain 91 131 IPR013210 -
Lele22g1740 1173 Gene3D Ribonuclease Inhibitor 379 531 IPR032675 -
Lele22g1740 1173 SUPERFAMILY L domain-like 500 748 - -
Lele22g1740 1173 SUPERFAMILY RNI-like 139 461 - -
Lele22g1740 1173 Pfam Leucine rich repeat 206 265 IPR001611 GO:0005515
Lele22g1740 1173 Pfam Leucine rich repeat 376 435 IPR001611 GO:0005515
Lele22g1740 1173 Pfam Leucine rich repeat 523 579 IPR001611 GO:0005515
Lele22g1740 1173 ProSiteProfiles Protein kinase domain profile. 840 1113 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele22g1740 1173 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 916 1130 - -
Lele22g1740 1173 Gene3D Ribonuclease Inhibitor 201 303 IPR032675 -
Lele22g1740 1173 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 265 488 - -
Lele22g1740 1173 Pfam Protein kinase domain 843 1109 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele22g1740 1173 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 90 264 - -
Lele22g1740 1173 SUPERFAMILY Protein kinase-like (PK-like) 829 1115 IPR011009 -
Lele22g1740 1173 Gene3D Transferase(Phosphotransferase) domain 1 916 1133 - -
Lele22g1740 1173 Pfam Leucine Rich repeat 182 198 IPR001611 GO:0005515
Lele22g1740 1173 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 472 1112 - -
Lele22g1740 1173 FunFam Putative LRR receptor-like serine/threonine-protein kinase 668 753 - -
Lele22g1740 1173 Gene3D Ribonuclease Inhibitor 532 754 IPR032675 -
Lele22g1740 1173 FunFam Putative LRR receptor-like serine/threonine-protein kinase 825 915 - -
Lele22g1740 1173 MobiDBLite consensus disorder prediction 1129 1173 - -
Lele22g1740 1173 SMART serkin_6 840 1122 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele22g1740 1173 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 489 578 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele22g1740 Lele-ChrLele22 22740903 22749596 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele22g1740 89 1118 Receptor kinase-like Gene Family AT5G56040 55.245 0.0 1109
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lele22g1740 Pkinase 1.3e-40 CL0016