Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele22g1732 ATGGCTTCGTCGTCGTCATCAAGCTCTTACAATTCACCATGTGCTGCCTGCAAATTCTTGAGGAGAAAATGCTTGCCAGGTTGCATCTTCGCGCCTTATTTTCCACCGGAAGAGCCACAGAAATTCGCCAACGTCCACAAGATATTCGGAGCCAGTAACGTCACTAAGCTTCTCAACGAGCTCCTTCCTCACCAGCGAGAAGACGCCGTGAACTCACTCGCCTACGAAGCAGAGGCTCGCGTCAGAGACCCCGTCTACGGCTGCGTCGGCGCCATCTCCTTCCTACAGAGACAGGTCCAGAGGCTTCAGAAGGAGCTTGACGCCGCTAACGCCGATCTGCTCCGTTATGCCTGCAACGACATAGCGCCGTCGTCGTCACAGCCTGGATTGTCCTCTTCAGTTCAACCCTGTGTTGTGCCTCAACGACAAAGCCCTATGGACTTTGGTGATGGTGCTTATTCTCTTCCTTGGGCTGATTCTTCTTCGGAGGACATCAATAATGGAGGAGGAGGAGTTATGGACTCTAGCCGCTGGAGCCTTATTACTTGGACTCTTGCTCATTTATCTACGTGA 573 0.5253 MASSSSSSSYNSPCAACKFLRRKCLPGCIFAPYFPPEEPQKFANVHKIFGASNVTKLLNELLPHQREDAVNSLAYEAEARVRDPVYGCVGAISFLQRQVQRLQKELDAANADLLRYACNDIAPSSSQPGLSSSVQPCVVPQRQSPMDFGDGAYSLPWADSSSEDINNGGGGVMDSSRWSLITWTLAHLST 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele22g1732 190 Pfam Lateral organ boundaries (LOB) domain 13 110 IPR004883 -
Lele22g1732 190 Coils Coil 92 119 - -
Lele22g1732 190 ProSiteProfiles LOB domain profile. 12 113 IPR004883 -
Lele22g1732 190 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 11 131 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele22g1732 Lele-ChrLele22 22668075 22668744 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele22g1732 4 187 AS2 family AT5G63090 65.217 3.46e-78 229
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Lele22g1732 LOB 5.7e-42 No_clan