Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele22g1726 ATGGAACATGAAGATCCTAAACCAGCAGAAGCCAAGGATTACTACACCACACAACGATGGTGGTCTGAAAATAATGAACAGGCTGTTAATGGTGTCGTCCCTCGTGCTGCTACCAACCAAAACTCAGACTTCTGTAACTTAAAGGAAATACTTACGCCACAAGTTCCCAGGGAAGGCGACAAAGTAGTACTGAAGGACCTGATTGATCGGCAGGTTGGTGACGAAGACGACGACGTTGTTGAGGAGAAGCATCATTACTATGGGCGAGCTGTGTCATCAGAAATAGAGGAGATATTTGAAGAAGATGGAAAGATCAGCAAAACAGATAACAGAGAAATTAATAGAGCTGAAGAAGAAGACATTTACGTGGCTGTTGGGAAAGATGACATGGACGTCTTAAAATGGGCTCTGGATCATGCAGTTTCTCCTACTTCTCGGATTTTCTTCATCCATGTTTCTGCTCCTATCACTTTGATTCCCACGCCAGGTCTCTTCAGTTCACTCACATTTCCATTAACTTGGATGCCTGCGTTTGTTTTGCTAGAGAATCCCTTATCTATATGTTCTGATGTGGCAATAATATTGATAAACACTGAATTCTCTGCATTTTGGTTAAGTGATTTGCTGATATATTTGATGGTATGTGTGATAGTGGGAAACTTACCAAGAAGCCAATTAAATCAGCAACAGGTGAAAAGTTATGAGAATCAAGAGATCAACAAGACGAACAGCATTCTGCAGAAGTACATCCAGTTGAGTAACGATGCTCAGGTGAGGGCAGAAACGGTGCATCTGGAGAGCAATGACACAACCAAAGCAATTCTGGAACTTATTTCTGTTCTTAACATCAAAAGCCTCTTTATGGGAATAAAAAAGCCTCCTCACTCATGGGGGAAGAACAAATTGAGCAGGGGGGAAATAGTGAAGCAAAATGCTCCTGAGTTCTGTGAGGTTGCTTTGGTTTGTCATGGGAATCAAATTCTGAAGACGACGAATTATGACATTGTTTCTCAACAGAGACACCATTCCTCAGCCAGATTCCTGCCCTGTATGTGCTTCTCAGTCGTAATTGCTAGCTCCAAGGATCTGAACATGAACCCTCACAACAACAGATATACAGACTCGGCTTCTTATCGCAACCGCAGGAGTGATTTAATTGGATCTGTGCCGCCGATGGTCCCTCCAATGATTGGGGATGCCAGCTCGAGCTACGGCCGGGGAGGTACTGCTCCTTATGGTCTTGCACCGGTTGGTTATAATATGGGTGGAAGAGGTGCCGGGAGTGCTTTCAGAGCGGCACCTGTTACCCCAAATTATCATGAGTTGCCGGCGTTCATGCCGCCTCCTGGAGGCTTTGACATAGGTCGCGATGGTGGCACTAGCCAAAGGGGCTTCGGCGGTAGACTCGGAAACGGTCATGCTGCTGATAGAAAAGATGACGTAGGTCGTCGCGGAAGTGGAAGAGACCGGGGCAGCAGTTTCACTGGAGGTCGGGGAGGTGGTAGATTTGGTGGAGCTCACGGAGACAGGACCTCGGGGAGAGGTGGTGGGGCTGGAGGTAGAGGTTTCAGTGGAAGCGCTGGATTTTGGAGTGGCCGTGGCCTTGGTGATGGTGGTAGTGGTAGAGGAGGAAGACATGGTGGTTCTTCCAAGGATGACTTGGACAACATAGCACTTCCCAAGCAAGATTTTAGAAATTTGGTTCCCTTTGAGAAGAATTTTTACATTGAAAGCCCATCGGTGGGGGCAATGTCCGATCATGAGCTTATGGTTTACCGTGCGAGTAGGGAGATCACCGTGCAAGGGCATGACATTCCTAAACCAATTCGAACGTTCCAAGATGCAAATTTTCCTGGTTACTGCCTTGAGGTGATTGCCAAATTGGGTTTTGTGGAGCCTTCCCCAATTCAGGCTCAAGGTTGGCCCATGGCTCTGAAGGGTAGAGATTTGATTGGCATTGCTGAGACCGGCTCAGGAAAAACACTCGCATATCTTCTTCCTGCTTTAGTGCATATCAGTGCACAACCTCGATTGGTACAAGGTGAAGGTCCCATTGTTTTGGTTCTGGCACCAACTAGAGAGTTGGCTGTTCAAATTCAGGAAGAAGCTGTAAAATTTGGTTCTCGAGCAAATATTAGAAGTACTTGTATCTATGGTGGTGCCCCAAAGGGACCTCAAATTCGTGATCTTAAAAGAGGTGTTGAAATTGTTATTGCCACACCTGGTCGCTTAATAGATATGTTGGAAGCTCAGCATACAAATCTGCGAAGGGTGACTTACCTTGTGTTGGATGAAGCTGATCGAATGCTAGACATGGGCTTTGAACCTCAGATAAGAAAAATTATTGGGCAGATCCGGCCTGATAGACAGACATTGTACTGGAGTGCAACATGGCCAAGAGAGGTTGAAACTCTGGCAAGGCAGTTTCTACGCAATCCGTATAAGGTCATTATTGGATCACCAGATTTGAAAGCAAATCAATCTATAAATCAAGTTGTTGAAGTTTTAACAGAAGTGGAGAAATACAATAGATTGATCAGACTGCTTAAAGAAGTGATGCATGGGAGTCGAATTCTAATATTTATTGAGACAAAAAAGGGTTGTGATCAAGTTACAAGACAGTTGAGAATGGATGGCTGGCCTGCACTTTCTATCCATGGTGATAAAAACCAGGCTGAAAGGGACTGGGTCTTGGCTGAATTTAAGAGTGGCAGAAGTTCAATAATGACTGCCACTGATGTTGCTGCACGGGGTCTTGTTCCATTAACATGGTTGAGATGCGGGCCTATCATTTTTAGCATAGGCTACTGCAGTGTGGGGCTAAAACGTAGTGAAATTGATTGCAGCCCATCCACAGTTAGGGAGCTGGTTGTCTCTGCAGCCTGGTTGACTCATGCATGCTTAGTGGATAATTGGATATGGGAGGTGGAAATGATGGTGAAGCTGCTCCTTATCCCTGCAAAGTTAAGGTGGGCACATTTAGGTGATGAATGTGTTGACTTTGAGTTTGATCTCCATAATCTTAGGGATGTGAAGGACATAAAATGTGTGATCAATTATGATTTCCCCTCAAGCCTGGAAGATTATGTCCACAGAATTGGTCGAACAGGTCGTGCAGGGGCTAAAGGAACTGCCTTCACCTTTTTCACGCATGCAAATGTCAAGTTTGCCAGGGATTTGATCAAGATCTTGCAAGATGCTGGCCAGGTTGTGAGTCCTGCTCTATCTGCCTTGTCTCGGTCAGCTGGTTCTGGTCAATTTGGATCTGGGGGAAACTTCCGCTCCAGGGGACGGGGAGGTTATGGGAATCGAGGTCACATATCAGGATCCAATACCATTCCTCTCGGTTCAAGGAAGCCTTGGTAG 3366 0.4569 MEHEDPKPAEAKDYYTTQRWWSENNEQAVNGVVPRAATNQNSDFCNLKEILTPQVPREGDKVVLKDLIDRQVGDEDDDVVEEKHHYYGRAVSSEIEEIFEEDGKISKTDNREINRAEEEDIYVAVGKDDMDVLKWALDHAVSPTSRIFFIHVSAPITLIPTPGLFSSLTFPLTWMPAFVLLENPLSICSDVAIILINTEFSAFWLSDLLIYLMVCVIVGNLPRSQLNQQQVKSYENQEINKTNSILQKYIQLSNDAQVRAETVHLESNDTTKAILELISVLNIKSLFMGIKKPPHSWGKNKLSRGEIVKQNAPEFCEVALVCHGNQILKTTNYDIVSQQRHHSSARFLPCMCFSVVIASSKDLNMNPHNNRYTDSASYRNRRSDLIGSVPPMVPPMIGDASSSYGRGGTAPYGLAPVGYNMGGRGAGSAFRAAPVTPNYHELPAFMPPPGGFDIGRDGGTSQRGFGGRLGNGHAADRKDDVGRRGSGRDRGSSFTGGRGGGRFGGAHGDRTSGRGGGAGGRGFSGSAGFWSGRGLGDGGSGRGGRHGGSSKDDLDNIALPKQDFRNLVPFEKNFYIESPSVGAMSDHELMVYRASREITVQGHDIPKPIRTFQDANFPGYCLEVIAKLGFVEPSPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPALVHISAQPRLVQGEGPIVLVLAPTRELAVQIQEEAVKFGSRANIRSTCIYGGAPKGPQIRDLKRGVEIVIATPGRLIDMLEAQHTNLRRVTYLVLDEADRMLDMGFEPQIRKIIGQIRPDRQTLYWSATWPREVETLARQFLRNPYKVIIGSPDLKANQSINQVVEVLTEVEKYNRLIRLLKEVMHGSRILIFIETKKGCDQVTRQLRMDGWPALSIHGDKNQAERDWVLAEFKSGRSSIMTATDVAARGLVPLTWLRCGPIIFSIGYCSVGLKRSEIDCSPSTVRELVVSAAWLTHACLVDNWIWEVEMMVKLLLIPAKLRWAHLGDECVDFEFDLHNLRDVKDIKCVINYDFPSSLEDYVHRIGRTGRAGAKGTAFTFFTHANVKFARDLIKILQDAGQVVSPALSALSRSAGSGQFGSGGNFRSRGRGGYGNRGHISGSNTIPLGSRKPW 1121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele22g1726 1121 Pfam Helicase conserved C-terminal domain 840 1040 IPR001650 -
Lele22g1726 1121 ProSiteProfiles DEAD-box RNA helicase Q motif profile. 610 638 IPR014014 GO:0003724
Lele22g1726 1121 Gene3D - 822 1081 IPR027417 -
Lele22g1726 1121 MobiDBLite consensus disorder prediction 472 487 - -
Lele22g1726 1121 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 593 818 IPR027417 -
Lele22g1726 1121 CDD SF2_C_DEAD 829 1049 - -
Lele22g1726 1121 FunFam probable ATP-dependent RNA helicase DDX17 572 819 - -
Lele22g1726 1121 MobiDBLite consensus disorder prediction 1080 1121 - -
Lele22g1726 1121 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 641 816 IPR014001 -
Lele22g1726 1121 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 844 1079 IPR001650 -
Lele22g1726 1121 MobiDBLite consensus disorder prediction 453 556 - -
Lele22g1726 1121 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 845 1056 IPR027417 -
Lele22g1726 1121 SMART helicmild6 869 1040 IPR001650 -
Lele22g1726 1121 SMART ultradead3 629 832 IPR014001 -
Lele22g1726 1121 Pfam DEAD/DEAH box helicase 635 805 IPR011545 GO:0003676|GO:0005524
Lele22g1726 1121 ProSitePatterns DEAD-box subfamily ATP-dependent helicases signature. 762 770 IPR000629 -
Lele22g1726 1121 CDD DEADc_DDX5_DDX17 622 816 - -
Lele22g1726 1121 Gene3D - 583 821 IPR027417 -
Lele22g1726 1121 PANTHER ATP-DEPENDENT RNA HELICASE DBP3 589 1077 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele22g1726 Lele-ChrLele22 22616014 22622554 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele22g1726 607 919 Eukaryotic Initiation Factors Gene Family AT3G19760 34.505 2.43e-51 185