Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele22g1723 ATGGACTCCAAACACACTCCTACACTGAAATTCCTCTGTAGCTACGGCGGCAAGATTCGTCTCCGTTCCACCGACGGCGAACTCCGTTACATGGGCGGCCACACAAGAGTCCTCTCTGTTGATCCTTCCATTTCCTTTTCAGACCTCATGGTAAAGATTGTAGAGTTCTGTGGTTCGTCTGTGACTTTGAAGTGTTCGTTGCCCAACGGAGACCTCGAGACGTTGATTTCCATTACTAACGATGAGGATTTGGCCATTACTATCGAAGAATATAACCGAGCTTCGTCGTCTAAGGCTCATCCGTTGAAGATCAGAGCCATTCTTTCGCCGCCCAGGTGTCTCAAGAAAGTATCTCCTCCTCCGTCTTCGCGATCGTCGAGCGCCGACCTCTCTTCGACTGGATCATTGACTCTCTCCTCCGCCGAATCATTGCCGTGTTCCCCTGCATATCGCGTTCTTCGTCCGGTCGCGTATCCGGTAGGAGTCCGTTACGGTTCGGGAAAACCGGGCTGCTATTCGGGTCAATTCTACAGAAGCTCTCGATTCCTGAACCGTGAACCTAGCTGCCCCAATTTCTGCAATCTCTGCCACTGA 594 0.5152 MDSKHTPTLKFLCSYGGKIRLRSTDGELRYMGGHTRVLSVDPSISFSDLMVKIVEFCGSSVTLKCSLPNGDLETLISITNDEDLAITIEEYNRASSSKAHPLKIRAILSPPRCLKKVSPPPSSRSSSADLSSTGSLTLSSAESLPCSPAYRVLRPVAYPVGVRYGSGKPGCYSGQFYRSSRFLNREPSCPNFCNLCH 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele22g1723 197 CDD PB1_UP2 12 108 - -
Lele22g1723 197 SUPERFAMILY CAD & PB1 domains 25 112 - -
Lele22g1723 197 SMART PB1_new 23 111 IPR000270 GO:0005515
Lele22g1723 197 Pfam PB1 domain 26 102 IPR000270 GO:0005515
Lele22g1723 197 PANTHER OS05G0427100 PROTEIN-RELATED 7 132 - -
Lele22g1723 197 Gene3D - 29 108 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele22g1723 Lele-ChrLele22 22601069 22601772 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele22g1723 9 110 MAP Kinase Kinase Kinase AT1G04700 46.078 5.47e-22 91.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele22g1723 22 22601069 22601772 Lele22g1723 22 22601069 22601772 ECH
Lele22g1723 22 22601069 22601772 Lele23g0261 23 1796478 1797183 hybridization
Lele22g1723 22 22601069 22601772 Lele24g1689 24 22249850 22250557 hybridization