Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele22g1719 ATGGATTCTGGGGGTGGGTTCTATTCTGTCGATGAGCTCAGATTGGACCCCAAGCGGCTAATTGATCCTAAGCTTCTATACGTTGGGCCCAGAATTGGAGAAGGAGCTCATGGCAAAGTCTACGAGGGCAAATACAAAAAGCAGACGGTTGCAATTAAAATTTTGCATAAAGGGGAAACTGCAGAAGAAATGGCCAAGAGAGAAGCCCGATTTGCTAGGGAGGTTGCAATGTTGTCTAGAGTTCAACATAAGAACTTGGTGAAGTTTATTGGTACCTGCAAGGAGCCTGTAATGGTGATAGTTACTGAAATCCTACTGGGAGGAACATTGCGTAAGTATTTGCTTAACATGCGACCAAAATGCTTGGACACGCATGTTGCTATTGGTTTTGCCCTTGATATTGCTCGTGCTATGGAGTGCCTGCATTCTCATGGGATCATTCACCGTGACCTGAAACCTGAAAACGTACTCTTGACTGAAGACCAGAAAACAGTCAAGCTAGCAGATTTTGGCTTAGCTAGAGAGGAGTCATTGACAGAGATGATGACTGCCGAAACAGGAACTTACCGTTGGATGGCTCCAGAGTTATATAGCACTGTAACACTGAAGCAGGGAGAGAAGAAGCATTACAACCATAAAGTGGATGCTTATAGCTTTGCAATTGTGCTGTGGGAGCTCTTACATAACAAACTACCCTTTGAAGGCAAGTCAAATCTCCAGGCAGCTTATGCAGCAGCCTTTAAAAATGTTAGACCCAGTGCAGAGAATCTCCCTGAAGAATTGGCTGTAATTCTAACTTCATGCTGGCAAGAAGACCCAAATGCCCGGCCCAACTTCACCCAAATAATCCAAATGCTGCTCAATTATCTTTACACCGTTTCACCTCCTAAACCCGTTATTCCTTCAAGAATATTCACTTCTGAGAATGCCATCTTCGCACCAGAGTCCCCTGGCACGAGTTCTTTGATGGCTAATAAATGTGACAACACAGGGGATACTCCCAGAGGAAAGGAGGAACTTAAGCCTAATGGCTTTCTCTGTTGCTCCAGCCAATGCTTTTAA 1062 0.4454 MDSGGGFYSVDELRLDPKRLIDPKLLYVGPRIGEGAHGKVYEGKYKKQTVAIKILHKGETAEEMAKREARFAREVAMLSRVQHKNLVKFIGTCKEPVMVIVTEILLGGTLRKYLLNMRPKCLDTHVAIGFALDIARAMECLHSHGIIHRDLKPENVLLTEDQKTVKLADFGLAREESLTEMMTAETGTYRWMAPELYSTVTLKQGEKKHYNHKVDAYSFAIVLWELLHNKLPFEGKSNLQAAYAAAFKNVRPSAENLPEELAVILTSCWQEDPNARPNFTQIIQMLLNYLYTVSPPKPVIPSRIFTSENAIFAPESPGTSSLMANKCDNTGDTPRGKEELKPNGFLCCSSQCF 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele22g1719 353 FunFam Kinase suppressor of Ras 1 15 105 - -
Lele22g1719 353 PRINTS Tyrosine kinase catalytic domain signature 102 115 IPR001245 GO:0004672|GO:0006468
Lele22g1719 353 PRINTS Tyrosine kinase catalytic domain signature 214 236 IPR001245 GO:0004672|GO:0006468
Lele22g1719 353 PRINTS Tyrosine kinase catalytic domain signature 140 158 IPR001245 GO:0004672|GO:0006468
Lele22g1719 353 PRINTS Tyrosine kinase catalytic domain signature 257 279 IPR001245 GO:0004672|GO:0006468
Lele22g1719 353 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 26 286 - -
Lele22g1719 353 Pfam Protein tyrosine and serine/threonine kinase 29 286 IPR001245 GO:0004672|GO:0006468
Lele22g1719 353 Gene3D Transferase(Phosphotransferase) domain 1 107 295 - -
Lele22g1719 353 SUPERFAMILY Protein kinase-like (PK-like) 27 311 IPR011009 -
Lele22g1719 353 CDD STKc_MAP3K-like 32 286 - -
Lele22g1719 353 ProSitePatterns Serine/Threonine protein kinases active-site signature. 146 158 IPR008271 GO:0004672|GO:0006468
Lele22g1719 353 SMART serkin_6 26 290 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele22g1719 353 Gene3D Phosphorylase Kinase; domain 1 16 105 - -
Lele22g1719 353 ProSitePatterns Protein kinases ATP-binding region signature. 32 53 IPR017441 GO:0005524
Lele22g1719 353 ProSiteProfiles Protein kinase domain profile. 26 290 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele22g1719 Lele-ChrLele22 22579275 22581870 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele22g1719 1 353 MAP Kinase Kinase Kinase AT5G50180 77.337 0.0 562
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Lele22g1719 PK_Tyr_Ser-Thr 2.2e-59 CL0016