Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele22g1712 ATGCCGCAGGATTCGTCTGAACAAGATGATCCTGATTCTGAGTTCGTGGAGGTTGATCCCACTGGTCGATATGGTCGGTACAAGGAGATTTTGGGGCAGGGGGCTTTCAAGAAGGTATATAGAGCATTTGATGAGTTGGAAGGAATTGAAGTGGCCTGGAATCAGGTTAAGGTGGCAGATCTATTGCGCAACGATGAAGATTTGGAGCGCCTATATTCAGAAGTGCATTTGCTGAAGACTTTGAAGCATAAAAATATAATTAAATTTTACAATTCATGGGTTGATACAAAGAATGAGAACATCAACTTCATCACTGAAATTTTCACTTCTGGAACTTTACGCCAATATCGGCAGAAACATAAGCATGTTGACTTAAGAGCATTGAAGAAATGGTCTAGACAGATTTTGGAGGGTCTTTCTTATCTTCACAGTCATGATCCGCCAGTTATTCATCGAGATTTAAAGTGTGACAATATTTTTGTCAATGGAAATCATGGCGAGGTTAAAATTGGTGACTTGGGATTGGCTGCCATACTTCAACAAGCCAATTCAGCTCACAGTGTTATAGGTACTCCGGAGTTTATGGCTCCCGAGCTTTATGAAGAGGAATACAATGAACTTGTTGATATCTATGCTTTTGGTATGTGCTTGCTTGAGTTGGTGACTGTCGAGTATCCATATGTTGAATGTGCTAATGCTGCTCAAATATACAAGAAAGTGACATCTGGAATCAAGCCAGCATCACTAGCAAAAGTGAAAGACCCTGGAGTTAAAGCATTTATAGAAAAGTGTATTGCAAATGTTTCTGAGCGGTTGCCTGCAAGGGAACTCTTAATGGATCCCTTTCTTCTGCCAGATGATGAAAGTGACAGTGTAGGTGGTTCTTTAAGGTTTAGAGCCCCTGACTTTGGATATAGTGACCATCATGTTATTCATGATCATCCTGAAGAAACTTCTGCCGAAACTGGTTGGGCATTCAAAGTAGAAGGTCAAAGGAGAGATGTCAATACTATATTTCTGAAACTGAGAATAGTAGACTCCACAGGTCATATGCGCAACATCCACTTCCCTTTTGATGTTAAAGCAGACACTGCAATTGCTGTCGCTAGTGAAATGGTTGAGGAGTTGGAACTCACAGATCAAGATGCTACAACTATTGCTGAAATGATTGACTTGGAAATTCGCTATCTCATTCCAGATTGGAATCCTAATGAAACTCCTACTGCTTATAGCATTGGTCAAGAATTAGCAGCTTCAGGTGGCCGTACCTCTGAAACTAGGGATGAGGCTTCTCCACAAGGAAATAATTCTCCAGCTTCTGCTGGCAGTCTTTCGCTAGAGCGATTACCTTCAGGTCGTAACTATTGGTCTGACTCACCCAAGACAGGTAGAAACTCTCCATTAAGGCCTGGTGCTTCAAAATTGTCTGGTCAAGTGGATTTGAATGCTGCGGGAACATCAACCGCGTATGGTGCTACTTCAGTTGAGCTACAGGATGGTAACTATAGTTGTGATGGTGATAATAGTGTAGAGAAGAAATCTAGTGGGACCGTTGATTCTCATTCCAGTGATAGAAGTATTACATTTGGGGATTTACAGGCAACCAATGGAGAGTCTCTTTTGGTAGAAAGACCTTTAGAATTGAAAGATGATGAATTAGAAGGTGTCAATATAATTGCTGCAAAACTCGAGCAATTATTGGCGAAACATCGAGAGGAGGAAGATGAACTAAAGAAAAAGCATGAATTAGCTGTGTCAAATTTTCTGAAGGAACTTCCTCAAAAAATTCAACATAAGGTCTTAAATATATGCAACTTGGAGGCATCTGATCGTGGAAATGTATAG 1845 0.407 MPQDSSEQDDPDSEFVEVDPTGRYGRYKEILGQGAFKKVYRAFDELEGIEVAWNQVKVADLLRNDEDLERLYSEVHLLKTLKHKNIIKFYNSWVDTKNENINFITEIFTSGTLRQYRQKHKHVDLRALKKWSRQILEGLSYLHSHDPPVIHRDLKCDNIFVNGNHGEVKIGDLGLAAILQQANSAHSVIGTPEFMAPELYEEEYNELVDIYAFGMCLLELVTVEYPYVECANAAQIYKKVTSGIKPASLAKVKDPGVKAFIEKCIANVSERLPARELLMDPFLLPDDESDSVGGSLRFRAPDFGYSDHHVIHDHPEETSAETGWAFKVEGQRRDVNTIFLKLRIVDSTGHMRNIHFPFDVKADTAIAVASEMVEELELTDQDATTIAEMIDLEIRYLIPDWNPNETPTAYSIGQELAASGGRTSETRDEASPQGNNSPASAGSLSLERLPSGRNYWSDSPKTGRNSPLRPGASKLSGQVDLNAAGTSTAYGATSVELQDGNYSCDGDNSVEKKSSGTVDSHSSDRSITFGDLQATNGESLLVERPLELKDDELEGVNIIAAKLEQLLAKHREEEDELKKKHELAVSNFLKELPQKIQHKVLNICNLEASDRGNV 614
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele22g1712 614 Pfam Oxidative-stress-responsive kinase 1 C-terminal domain 340 391 IPR024678 GO:0004674|GO:0005524
Lele22g1712 614 ProSitePatterns Serine/Threonine protein kinases active-site signature. 149 161 IPR008271 GO:0004672|GO:0006468
Lele22g1712 614 Gene3D Phosphorylase Kinase; domain 1 9 106 - -
Lele22g1712 614 MobiDBLite consensus disorder prediction 417 476 - -
Lele22g1712 614 SUPERFAMILY Protein kinase-like (PK-like) 27 322 IPR011009 -
Lele22g1712 614 ProSiteProfiles Protein kinase domain profile. 25 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele22g1712 614 MobiDBLite consensus disorder prediction 417 444 - -
Lele22g1712 614 FunFam probable serine/threonine-protein kinase WNK9 108 288 - -
Lele22g1712 614 MobiDBLite consensus disorder prediction 503 524 - -
Lele22g1712 614 MobiDBLite consensus disorder prediction 450 472 - -
Lele22g1712 614 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 7 597 - -
Lele22g1712 614 Coils Coil 553 587 - -
Lele22g1712 614 SMART serkin_6 25 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele22g1712 614 Gene3D - 336 426 - -
Lele22g1712 614 CDD STKc_WNK 23 283 - -
Lele22g1712 614 Gene3D Transferase(Phosphotransferase) domain 1 108 291 - -
Lele22g1712 614 FunFam Probable serine/threonine-protein kinase WNK1 10 106 - -
Lele22g1712 614 Pfam Protein kinase domain 28 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele22g1712 Lele-ChrLele22 22550466 22553786 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele22g1712 1 423 MAP Kinase Kinase Kinase AT3G51630 54.651 1.10e-163 477
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Lele22g1712 Pkinase 3.2e-51 CL0016