Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele22g1704 ATGTCTCTGATGAGCTTCTTCATGGATCCAAAGTTCACTTTTGTTGGAGTTGAAGTAGAGAAAGATATAAGTAAGCTTGGTGATGAGTATGTTTTGAAGTTCACGATCAGCCAGGACATTAGAAAACTGCAAAGGGTTACATGCGCTGCTTATCGGTTAAGGGTTGCATCATGTTCTGATGCTTATTTTGATTTTGGAGTTGCAATGTTGTTGCTGGGGTTATTGCTAATTATGGATATTTTGCTTATGGCCAATCGTAAAGATAATTTGGATTTTTTGCCCCTAATTTGTTTGACAAAAACATTACATTTTTTGAATAAGCCTAGGAATGTTTGCATGAGCAACTGGGAGGATAGAACATTGAGCAAGGAACAAGTTGAGTCTGTGTTATTGTATGAAGGGAAGTCCATAGAAACCGCAGTCACCGATAAGGCCGCCGTAGCAGATGAATGGGTTGAAGAGATCATAAAGAAATATAGTTTGCACCCGAAAGTGGTTGTTGGATTCGAGGTAGAGTGGAAGCCAGTCGGAATTTTCATGGAACCTGCAACATTACAACTCTGCATCGGTGATAAGTGCCTCATTCTTCAACTCTTTTACATGGAACAGTTTCCCACGACTTCGCTCAAGAGCTTCTTCCTGAATAGGGATTTCACATGGTTATCTCATACCGATTTCCTCACAAATCTTCTCGTCTTTCTACCCTTGTTTCGGCTCGACATCATGGAGATGGAGCGTGTCTTCGAATTTCCTCATACTCACCTCGATCGTCGGCCGAGGAAGAGGCCGCGTTTAGGTTGGGACATCCCTGAGGCCCCGAAGGCTCAGGTAGGATTGTTTTGTGGACAAGATGTTGGAAATCTTTCAAGCTATGCACCATCAAGGGGGCCCTCAGAGCATACAAATAATTCTCTAAATGTTAAGGGAGTAGCTCGAAATGGTTCTCCCCCATGGCGAGATGATGACAAAGATGGGCATTACATGTTTGGGCTTGGAGAAAATTTAACTTCTCGCTATAAGATACACAGCAAAATGGGGGAAGGAACTTTTGGGCAAGTCTTGGAATGCTGGGACCGAGAACGGAAGGAGATGGTTGCAGTAAAAATTGTACGTGGGATAAAAAAGTATAGAGAAGCTGCCATGATAGAGATTGAGGTGCTGCAACAGCTTGCTAAACATGATAAAGGTGGAAGTCGTTGTGTACAAATACGGAACTGGTTTGACTATCGTAATCATATCTGTATTGTGTTTGAGAAACTTGGGCCAAGCTTATACGATTTTCTTCGGAAAAACAATTATCGCTCATTTCCCATTGATCTTGTTCGCGAGATTGGCAGACAACTATTGGAATGTGTAGCATTCATGCATGATTTGCGCATGATCCATACTGACTTGAAGCCAGAAAACATACTACTAGTTTCGCCAGAATATGTCAAAGTTCCTGACTACAGGGGCTCATCCAGATCACCAAGTTCTTATTTCAAGAGAGTGCCAAAGTCAAGTGCTATTAAAGTTATTGATTTTGGCAGCACGACTTATGAGCGAGATGATCAGACTTACATTGTATCAACACGACATTATAGGGCACCCGAAGTTATACTTGGTCTTGGATGGAGTTATCCATGTGATATATGGAGTGTGGGATGCATATTGATAGAGCTATGCACGGGTGAAGCTTTGTTTCAGACTCATGAGAACTTGGAGCACCTTGCAATGATGGAAAGGGTGCTTGGTCCGTTGCCTCAGCACATGTTGAAGAGAGTGGACCGACATGCAGAGAAGTATGTTCGAAGGGGTAGACTAGATTGGCCAGAGGGGGCCAATTCTAGGGATAGTATTAAAGCTGTAATGAAGCTGCCTCGGCTTCAGAATCTGGTAATGCAGCATGTGGACCATTCAGCAGGAGATCTGATACACGTGTTGCAGGGGTTACTTAGATATGACCCTTCTGAAAGACTAACAGCTAGGGAGGCTCTAAGACATCCCTTCTTTACAAGAGATCACCTTAGGAGATAG 2016 0.4301 MSLMSFFMDPKFTFVGVEVEKDISKLGDEYVLKFTISQDIRKLQRVTCAAYRLRVASCSDAYFDFGVAMLLLGLLLIMDILLMANRKDNLDFLPLICLTKTLHFLNKPRNVCMSNWEDRTLSKEQVESVLLYEGKSIETAVTDKAAVADEWVEEIIKKYSLHPKVVVGFEVEWKPVGIFMEPATLQLCIGDKCLILQLFYMEQFPTTSLKSFFLNRDFTWLSHTDFLTNLLVFLPLFRLDIMEMERVFEFPHTHLDRRPRKRPRLGWDIPEAPKAQVGLFCGQDVGNLSSYAPSRGPSEHTNNSLNVKGVARNGSPPWRDDDKDGHYMFGLGENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAVKIVRGIKKYREAAMIEIEVLQQLAKHDKGGSRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNNYRSFPIDLVREIGRQLLECVAFMHDLRMIHTDLKPENILLVSPEYVKVPDYRGSSRSPSSYFKRVPKSSAIKVIDFGSTTYERDDQTYIVSTRHYRAPEVILGLGWSYPCDIWSVGCILIELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGANSRDSIKAVMKLPRLQNLVMQHVDHSAGDLIHVLQGLLRYDPSERLTAREALRHPFFTRDHLRR 671
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele22g1704 671 Gene3D - 131 223 IPR036397 GO:0003676
Lele22g1704 671 Gene3D - 1 130 IPR036397 GO:0003676
Lele22g1704 671 MobiDBLite consensus disorder prediction 291 321 - -
Lele22g1704 671 FunFam Serine/threonine-protein kinase AFC2 326 419 - -
Lele22g1704 671 Pfam Protein kinase domain 339 664 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele22g1704 671 FunFam Serine/threonine-protein kinase AFC2 415 664 - -
Lele22g1704 671 MobiDBLite consensus disorder prediction 291 310 - -
Lele22g1704 671 PANTHER SERINE/THREONINE-PROTEIN KINASE DOA-RELATED 242 667 - -
Lele22g1704 671 CDD PKc_CLK 326 664 - -
Lele22g1704 671 Gene3D Phosphorylase Kinase; domain 1 326 419 - -
Lele22g1704 671 ProSiteProfiles Protein kinase domain profile. 339 664 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele22g1704 671 Gene3D Transferase(Phosphotransferase) domain 1 393 664 - -
Lele22g1704 671 SUPERFAMILY Ribonuclease H-like 161 221 IPR012337 -
Lele22g1704 671 SUPERFAMILY Protein kinase-like (PK-like) 326 668 IPR011009 -
Lele22g1704 671 SMART serkin_6 339 664 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele22g1704 671 ProSitePatterns Serine/Threonine protein kinases active-site signature. 460 472 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele22g1704 Lele-ChrLele22 22484440 22491448 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele22g1704 344 664 Core Cell Cycle Gene Families AT1G76540 25.904 1.96e-27 111
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CLK Lele22g1704 Pkinase 1.2e-49 CL0016