Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele22g1700 ATGCAGCAATTCTGGTCTGGGAGTAGCATTGACAAGAACAAAGAAATGGTGGAGAATTTGCAACGCTATGGAGTAATATCATCGAAAAAGGTAGCCGAGGTTATGGAGACTGTAGACAGAGCTTTGTTTGTTCCTGGTGGAACTCCACCTTATGTTGACAGCCCAATGGCAATAGGCTACAATGCCACTATATCCGCACCTCATATGCACGCCATGTGCCTCCAGTTGCTGGAGCAGAATTTGCAGCCTGGGATGCATGCTCTGGATGTTGGCTCTGGGACTGGATATCTTACAGCATGCTTTGCTTTGATGGTTGGACCCCAAGGTCGTGCTGTTGGCGTGGAGCATATTCCTGAATTAGTCTCTTCTTCATTGGAGAATATTCAGAAAAGTGCTGCAGCTCCACTGTTAAAAGATGGTTCCCTCTCGGTGCATGCTGGTGATGGAAGGCAAGGTTTGCCAGAGCATGCTCCGTACGATGCCATACATGTTGGAGCAGCGGCACAAGAAATCCCCCAAGCACTCATAGACCAGTTGAAGCCTGGAGGTAGAATGGTGATTCCTGTTGGAAACGTATTTCAGGATCTAAAGGTAATTGACAAAAACACTGACGGTTCTGTGAGCGAGCGGAGTGAGACTTCTGTTCGCTATGTGCCTCTCACAAGTCGAGATTCTCAACTGCGAGGTTACTGA 693 0.4791 MQQFWSGSSIDKNKEMVENLQRYGVISSKKVAEVMETVDRALFVPGGTPPYVDSPMAIGYNATISAPHMHAMCLQLLEQNLQPGMHALDVGSGTGYLTACFALMVGPQGRAVGVEHIPELVSSSLENIQKSAAAPLLKDGSLSVHAGDGRQGLPEHAPYDAIHVGAAAQEIPQALIDQLKPGGRMVIPVGNVFQDLKVIDKNTDGSVSERSETSVRYVPLTSRDSQLRGY 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele22g1700 230 Pfam Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) 12 224 - -
Lele22g1700 230 PANTHER PROTEIN-L-ISOASPARTATE O-METHYLTRANSFERASE 5 227 IPR000682 GO:0004719|GO:0036211
Lele22g1700 230 Gene3D Vaccinia Virus protein VP39 5 230 IPR029063 -
Lele22g1700 230 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 13 200 IPR029063 -
Lele22g1700 230 ProSitePatterns Protein-L-isoaspartate(D-aspartate) O-methyltransferase signature. 147 162 IPR000682 GO:0004719|GO:0036211
Lele22g1700 230 TIGRFAM pimt: protein-L-isoaspartate O-methyltransferase 11 226 IPR000682 GO:0004719|GO:0036211
Lele22g1700 230 CDD AdoMet_MTases 88 189 - -
Lele22g1700 230 FunFam Protein-L-isoaspartate O-methyltransferase 4 230 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele22g1700 Lele-ChrLele22 22455403 22457833 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele22g1700 22 22455403 22457833 Lele17g1109 17 21400568 21403635 CCT
Lele22g1700 22 22455403 22457833 Lele18g0432 18 2545814 2547631 CCT
Lele22g1700 22 22455403 22457833 Lele19g0451 19 2596264 2599086 CCT
Lele22g1700 22 22455403 22457833 Lele20g1001 20 15954438 15957376 CCT
Lele22g1700 22 22455403 22457833 Lele22g1700 22 22455403 22457833 ECH
Lele22g1700 22 22455403 22457833 Lele23g0286 23 1956125 1958717 hybridization
Lele22g1700 22 22455403 22457833 Lele24g1669 24 22134929 22136841 hybridization