Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele22g1696 ATGGAGCGCATGGTGACAATGGAGGGACGCAATGGAAGAGCAAGCCTGGTATTGGTTAGCCCGGTTCCCTCTCTTCTCTTTATATATACCCTCTTTCCTCCTTCCCACTTCTCACACCACTCTTCCTCTTCTTCTTCATATTCCTCCGTTTCAACAATGACTACTACCTTCTTCCTCTGCTTTCTCCTCATCCCAACCCTCATTTCTTCTTCCCCTTTGGACGACCCTGAATCCGTCGTCCAAGAGGTAAACAGGAAAATCAATGCCTCTGACGCTAGGAGGAATTTGGGCTACCTCTCGTGTGGAACTGGCAACCCTATCGACGATTGCTGGAGGTGCGATCCTAATTGGGAGAAGAACAGGCAGAAGCTAGCCGATTGTGCAATAGGGTTCGGGAAGAATGCCATTGGCGGTAAAAACGGCAGGATTTACGTGGTGACGGACGCCGGCGATGACGATCCGGTGAATCCCCGGCCGGGGACTCTCAGGTACGCCGTCATTCGAGACGAACCGTTGTGGATTATATTCGCGAGGGACATGGTGATTCATTTGAAGGAGGAGCTGATCATGAATTCCTTCAAGACCATCGATGGAAGAGGCGCGAGCGTGCACATTGCGGGTGGGCCCTGCATAACGATCCAGTACGTAACCAACATTATAATCCATGGAATTCACATACACGACTGTAAGCAAGGAGGGAATGCTATGGTGAGAAGCTCCCCACGGCACTACGGCTGGAGAACCATATCAGACGGCGACGGCGTGTCCATCTTCGGAGGAAGCCACGTGTGGGTAGATCACTGCTCGCTGTCAAATTGTAAAGACGGTTTGATCGATGCCATTATGGGGTCCACCGCTATAACCATTTCCAACAATTACATGACGCACCACGATAAGGTCATGTTACTGGGTCACAGCGATTCTTATACCCAGGACAAGAACATGCAAGTCACCATCGCTTTTAACCACTTTGGAGAAGGCCTCGTCCAAAGAATGCCAAGATGCAGACTTGGATATTTCCATGTGGTGAACAACGACTACACTCATTGGGAAATGTATGCAATTGGAGGAAGTGCAAACCCAACCATCAATAGCCAGGGCAACAGATTCGTGGCACCCAACAACAGATTCAGCAAAGAGGTGACAAAGCATGAGGATGCACCAGAAAATGAATGGAGGGGTTGGAATTGGAGATCAGAAGGGGACTTGTTGGTAAACGGTGCGTTTTTCAGGTCATCAGGTGCTGGAGCCTCTTCTAGCTATGCAAGGGCTTCTAGCTTGAGTGCCAGACCATCTTCTCTTGTGGGTTCTCTCACCTCTGGTGCTGGCACCCTTACCTGCAGAAAAGGTTCTCGCTGCTGA 1362 0.5015 MERMVTMEGRNGRASLVLVSPVPSLLFIYTLFPPSHFSHHSSSSSSYSSVSTMTTTFFLCFLLIPTLISSSPLDDPESVVQEVNRKINASDARRNLGYLSCGTGNPIDDCWRCDPNWEKNRQKLADCAIGFGKNAIGGKNGRIYVVTDAGDDDPVNPRPGTLRYAVIRDEPLWIIFARDMVIHLKEELIMNSFKTIDGRGASVHIAGGPCITIQYVTNIIIHGIHIHDCKQGGNAMVRSSPRHYGWRTISDGDGVSIFGGSHVWVDHCSLSNCKDGLIDAIMGSTAITISNNYMTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRLGYFHVVNNDYTHWEMYAIGGSANPTINSQGNRFVAPNNRFSKEVTKHEDAPENEWRGWNWRSEGDLLVNGAFFRSSGAGASSSYARASSLSARPSSLVGSLTSGAGTLTCRKGSRC 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele22g1696 453 SMART amb_all 179 376 IPR002022 -
Lele22g1696 453 PANTHER PECTATE LYASE 18-RELATED 73 451 IPR045032 GO:0030570
Lele22g1696 453 SUPERFAMILY Pectin lyase-like 84 447 IPR011050 -
Lele22g1696 453 FunFam Pectate lyase 104 446 - -
Lele22g1696 453 Pfam Pectate lyase 189 370 IPR002022 -
Lele22g1696 453 Gene3D - 104 446 IPR012334 -
Lele22g1696 453 PRINTS Pollen allergen Amb family signature 151 176 IPR018082 -
Lele22g1696 453 PRINTS Pollen allergen Amb family signature 395 419 IPR018082 -
Lele22g1696 453 PRINTS Pollen allergen Amb family signature 187 203 IPR018082 -
Lele22g1696 453 PRINTS Pollen allergen Amb family signature 424 447 IPR018082 -
Lele22g1696 453 PRINTS Pollen allergen Amb family signature 331 350 IPR018082 -
Lele22g1696 453 PRINTS Pollen allergen Amb family signature 251 272 IPR018082 -
Lele22g1696 453 PRINTS Pollen allergen Amb family signature 353 372 IPR018082 -
Lele22g1696 453 PRINTS Pollen allergen Amb family signature 127 144 IPR018082 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele22g1696 Lele-ChrLele22 22422121 22427394 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele22g1696 30 453 Polysaccharide Lyase AT5G63180 76.581 0.0 671