Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele22g1695 ATGGATGGGAGGCGGCATTCAGTTGATATTCCTATTTCGAAAACTCTTATAGCTTTGAGGAGAGTCAGGTCATTGAGGGATCCATCTACAAATTCTATGAGCAAACTCTGTTCTTCCATTGATAATCTACACTGGGAAAACAGTTCGGGCAATGGGATTTCTCTGCGGTTCTTGGACGCTTCTCGCGCTTGTGATTCTGATGATAATGGTGCATTAAGGTCGAAGAATTTAAGTTGTAGCATGCGCAGAGAGAACGATGCTGCTGATTTTGAATTGAACTGTGGCCATTTAAACTCTAAACTGAAGTCTTGTCCCGAAGGGCATCAGGATGAAGAGCTAGCTTACTCTAATTTGAATCAGGAAGGCAATTCCGGTATTAAGTTGGGAAGTGATGGCTGCTACAGCAACCATAGATGTAAGGACTTAGATATAGCATCTATTATGCCTCCTAGCAACGAGGCAACTTCAGGATCATCAAAGTTAGGGACAATTGATCATTCTATGTTGACTAGAAAAACTCTATGCAAGAATCAAGTGAAATCATCCAAAGTTTTGGGCGAAATTGCAGGTAGTCCATGCCTTTCGGTCGGTGAAGCTTTCTCAGCTTATAGTTCTTCGACGACTATGAATCAAGTTGTAGATATTGTAGATGATAATCAGCAAGGGTGTGGAATAAGCTGTTGTTGGTCAAAATCACCAAGGTTTAGAGAATCAAATGTATATTCTGATATAGAAGACCGTCCCCTGATATCCTGGCACACAGATGAGACAGCTCTTTATGGACATAAAAACACGAGACACATTGGTGGTGAAATCAGTCCAAATTTTGAAACTCCTAGAAGTTTATGCATGAAATTCAGGCCAAAATCTTTTAATGATTTGGTTGGACAAAATGTGGTAGCGAGGTCTCTTTTGGGTGCAATCTTTAAGGGAAGGGTGACCTCATTCTATCTCTTCCATGGTCCTCGTGGTACTGGCAAGACATCTGCTTCTAGGATTTTCGCTGCTGCACTGAATTGTCTCTCCCTTGAGGCGGAAAAGCCATGTGGTCTGTGCAGAGAGTGTGTTTTGTTCTTTTCTGGTAGAAGTAAAGACGTTAAAGAAATTGATTCTGTGAGACTTAATCGTATTGACAAAGATGCTTTGGACTTCATCGCTGCTAAATCCTGTGGTTCACTTAGGGATGCAGAAATCATGCTTGATCAGCTGAGCTTGCTTGGTAAAAAAATCACAGTTTCCTTGGCCTATGAGCTTACTGGTATCATTTCTGATGATGAATTGCTTGAATTACTGGATCTGGCTTTGTCCTCTGACACTTCAAATACAGTTAAAAGAGCGCGAGAGTTAATGAGATCAAGGGTGGATCCTCTACAACTTATATCGCAGCTGGTAAATCTAATCATGGACATTCTTGCAGGAAAATGTGACGATGGTGGTTCTAAAGTCAGAATGAGGTTTTCTAGCAGATATAAATCTGAAGCGGAGCTTCAAAAACTAAATCGTGCATTGAGAATACTTTCTGAAACGGAGAAGCAACTTCGAATTTCCAAGAATCAAACAACATGGTTCACAGTAGCTCTTCTACAGTTAAGCTCTGCAGAACATTCTTCCGTTGAAGCAAATGATACTAAATTGAGAGATGCATGCAATGCAGATGGTGATTTCTGCAGTACATCATCTACAGGGGATAGCAGGAAGCATCTTGCCTCTGCTCAGTATGATAACAAGTTGTTTAGATTAGGACAACAGGATCACACATTAAGTTCCATATGGCATAAAGCGACAGAGTCATGTGAATCTAACAGACTCAAGACTTTTCTTAGGAAACAGGGGAAGTTGTCTTCGCTCTGTGTTGATCGCGATCTAGCACTTGCTGAGTTGGATTTCCAGCATCGCAACTACGTATGTAGGGCTGAGAAGTCATGGAAAATGATTGCCAGTTCCCTCCAGCTCATATTGGGTTGTAACATAGAGCTCAGGATCAATCTTGTGCCTTGTACTTCTGATTCTAAATACGCCAAGTTGAAGAGGTCATCTTTCAGTTTTTTTAGTTGTTCCCGTAGAATTCGTCGAAAAGCACTCTCAGATAATGAACAAGGAAGTGAACCAGATTACACTGATCATACCTCACAGAAAGCCATGATGAAGGATAGAACTTTTACTTGTAGATCTGATTGTGGATCTCAGATGCAACAAGCTGAGCCTTATCATGGAATGGAGGTTGTGACAGCATTGAGAGATGGTGAAGGAAATTTGCTGAGCTCAAGGAAGAGTTTGTTGAATAGTTCGTGTCAAGAGACTTCAAGGACCTCAAGTTCTGGGTTTGATTCCTCTAAGGAAGAGGGATTTGATTATGCACACCTAGTTTCATCAAACCCTGATTCAGACTATCAATCAAAATGTTTCCCTCGAACTTTCTGGATTCATAAGAAGAAGTTTCGTTCTCCTGATCTATCTCAGTTGGATTTTGAGGGCACCCAACAACAGAAAGAATTTGTTTCATCTATCCCAAATTACTCCTGTTCCGAGACATATAGCTATGCTAGTGAACCATGTGTTTTCTCCACCAGCTCTAACAACTGTACCACAGCCTTCCAAAATGAGAAAAGGTAG 2613 0.4106 MDGRRHSVDIPISKTLIALRRVRSLRDPSTNSMSKLCSSIDNLHWENSSGNGISLRFLDASRACDSDDNGALRSKNLSCSMRRENDAADFELNCGHLNSKLKSCPEGHQDEELAYSNLNQEGNSGIKLGSDGCYSNHRCKDLDIASIMPPSNEATSGSSKLGTIDHSMLTRKTLCKNQVKSSKVLGEIAGSPCLSVGEAFSAYSSSTTMNQVVDIVDDNQQGCGISCCWSKSPRFRESNVYSDIEDRPLISWHTDETALYGHKNTRHIGGEISPNFETPRSLCMKFRPKSFNDLVGQNVVARSLLGAIFKGRVTSFYLFHGPRGTGKTSASRIFAAALNCLSLEAEKPCGLCRECVLFFSGRSKDVKEIDSVRLNRIDKDALDFIAAKSCGSLRDAEIMLDQLSLLGKKITVSLAYELTGIISDDELLELLDLALSSDTSNTVKRARELMRSRVDPLQLISQLVNLIMDILAGKCDDGGSKVRMRFSSRYKSEAELQKLNRALRILSETEKQLRISKNQTTWFTVALLQLSSAEHSSVEANDTKLRDACNADGDFCSTSSTGDSRKHLASAQYDNKLFRLGQQDHTLSSIWHKATESCESNRLKTFLRKQGKLSSLCVDRDLALAELDFQHRNYVCRAEKSWKMIASSLQLILGCNIELRINLVPCTSDSKYAKLKRSSFSFFSCSRRIRRKALSDNEQGSEPDYTDHTSQKAMMKDRTFTCRSDCGSQMQQAEPYHGMEVVTALRDGEGNLLSSRKSLLNSSCQETSRTSSSGFDSSKEEGFDYAHLVSSNPDSDYQSKCFPRTFWIHKKKFRSPDLSQLDFEGTQQQKEFVSSIPNYSCSETYSYASEPCVFSTSSNNCTTAFQNEKR 870
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele22g1695 870 Gene3D - 420 533 - -
Lele22g1695 870 Gene3D - 275 406 IPR027417 -
Lele22g1695 870 Pfam DNA polymerase III, delta subunit 297 382 - -
Lele22g1695 870 Coils Coil 496 519 - -
Lele22g1695 870 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 291 372 IPR027417 -
Lele22g1695 870 FunFam Protein STICHEL-like 1 isoform C 421 534 - -
Lele22g1695 870 SUPERFAMILY post-AAA+ oligomerization domain-like 421 532 IPR008921 GO:0003677|GO:0006260
Lele22g1695 870 PANTHER REPLICATION FACTOR C / DNA POLYMERASE III GAMMA-TAU SUBUNIT 283 370 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele22g1695 Lele-ChrLele22 22399263 22402912 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele22g1695 22 22399263 22402912 Lele22g1695 22 22399263 22402912 ECH
Lele22g1695 22 22399263 22402912 Lele23g0292 23 2005125 2010087 hybridization
Lele22g1695 22 22399263 22402912 Lele24g1662 24 22095186 22098857 hybridization