Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele22g1692 ATGCTAAAAATTGCCAGCAACAATGTGGAAAATTTATCTTCGTCTCCCAAATCTCCCACATCCTTTGTTGCTGACCATCATATAAAAGCTCCTGCTGGTAGTAAGGCCCAAACTGCTGGGATTGCTGTGAGGCATGTGCGGCGATCACACTCTGGAAAGCTTGTACGGGTGAAGAAGGATGGTGCTGGTGGTAAGGGCACGTGGGGAAAATTGCTTGATACTGATGGTGAATCTCATATAGACAGGAAAGATCCAAATTATGATAGTGGTGAGGAACCCTATCAGCTAGTTGGATCTACTGTCACTGACCCCTTAGATGAATTCAAGAAGGCAGTTGTTTCCACCACCGAGGAATATTTCAGCACTGGTGATGTGGATTTAGCTGCCTCTGATCTCAGAGAACTTGGTTCAAGTGAATATTATCCATACTTCATCAAGCGCCTTGTGTCTATGGCCATGGATAGGCATGATAAGGAGAAAGAAATGGCTTCTGTTTTGCTTTCAGCATTGTATGCTGATGTGATTAGTCCTGCTCAGATTAGGGATGGATTTTTTATGCTGCTCAAATCTGCTGATGATCTTGCAGTGGACATACTGGATGCAGTTGACGTCCTTGCTTTGTTTCTGGCTCGGGCTGTTGTTGATGATATCCTTCCTCCAGCCTTTCTTGCAAGGGCAAGAAAGGCACTTCCTGAGTCATCCAAGGGGTTTCAGGTTATACAGACTGCAGAGAAGAGTTATCTCTCAGCTCCACATCACGCAGAGCTTGTAGAGAGGCGATGGGGTGGTACCACTCACATCACTGTTGAAGAAGTAAAGAAGAAGATTTCTGATTTATTAAGAGAATATGTTGAAAGTGGTGACATGGTTGAAGCCTGCAGGTGCATAAGGGAGTTGGGGGTTTCATTCTTTCATCATGAGGTTGTGAAGAGGGCTCTGGTTCTCGCCATGGAGACCCGTTCAGCAGAATCTTTAATGTTGAAGTTATTAAAAGAAGCAGCAGAAGAAGGACTCATTAGTTCCAGCCAAATGGCGAAAGGTTTTTCTCGCTTGGCAGAAGGCCTAGATGATCTTGCACTTGACATTCCATCAGCCAAAACTTTGTTTCAATCATTGGTACCCAGGGCAATATCTGAAGGATGGCTCGATGCTTCATTTTTGAAACCCTCTGGTGAAGATGGGGATATCCCAGTTGAAGATGAAGAAGTGAGGAACTACAAAAAGGAGGCAGTAACTATAATTCATGAGTATTTTCTCTCTGATGATATTCCTGAACTCATTCGGAGTCTTGAAGATCTTGGAGCACCTGAGTTTAATCCAATATTTTTGAAGAAGCTAATTACTCTTGCTATGGACAGAAAAAACAGAGAAAAGGAAATGGCATCAGTACTACTATCTGCTCTTCATATAGAGATATTCTCCACAGAGGATATAGTTAATGGTTTTGTGATGCTTCTGGAAAGTGCAGAAGATACTGCACTGGATATTTTAGATGCTTCAAATGAACTTGCCCTGTTTTTAGCTCGGGCTGTGATCGATGATGTATTAGCCCCTCTGAATTTAGAAGAAATTGGCAGCAGGTTGCCCCCTAAATGCAGCGGTAGTGAAACTGTGCGTATGGCTCGATCCCTCGTTGCAGCTCGTCATGCTGGTGAGAGGTTGTTGAGATGTTGGGGTGGGGGTACTGGATGGGCCGTGGAGGATGCCAAGGACAAGATCATGAAGCTGTTGGAGGAGTATGAAAGTGGGGGTGTGGTGAGTGAAGCATGCCAGTGTATTCGTGATCTAGGAATGCCTTTCTTTAACCATGAGGTGGTGAAGAAAGCTTTGGTCGTGGCTATGGAGAAGAAGAATGATAGGATGCTGGATCTGCTGCAGGAGTGCTTCAGTGAAGGTCTGATCACTATCAATCAGATGACAAAAGGCTTCACCCGCATCAAGGACGGTCTCGATGATCTGGCTCTGGACATTCCAAATGCACGCGAGAAATTTGCCTTCTATGTGGAGCATGCAAACAACAAGGGTTGGCTTTTACGTTCATTTGATTCTCCAGATGCCTGA 2061 0.4459 MLKIASNNVENLSSSPKSPTSFVADHHIKAPAGSKAQTAGIAVRHVRRSHSGKLVRVKKDGAGGKGTWGKLLDTDGESHIDRKDPNYDSGEEPYQLVGSTVTDPLDEFKKAVVSTTEEYFSTGDVDLAASDLRELGSSEYYPYFIKRLVSMAMDRHDKEKEMASVLLSALYADVISPAQIRDGFFMLLKSADDLAVDILDAVDVLALFLARAVVDDILPPAFLARARKALPESSKGFQVIQTAEKSYLSAPHHAELVERRWGGTTHITVEEVKKKISDLLREYVESGDMVEACRCIRELGVSFFHHEVVKRALVLAMETRSAESLMLKLLKEAAEEGLISSSQMAKGFSRLAEGLDDLALDIPSAKTLFQSLVPRAISEGWLDASFLKPSGEDGDIPVEDEEVRNYKKEAVTIIHEYFLSDDIPELIRSLEDLGAPEFNPIFLKKLITLAMDRKNREKEMASVLLSALHIEIFSTEDIVNGFVMLLESAEDTALDILDASNELALFLARAVIDDVLAPLNLEEIGSRLPPKCSGSETVRMARSLVAARHAGERLLRCWGGGTGWAVEDAKDKIMKLLEEYESGGVVSEACQCIRDLGMPFFNHEVVKKALVVAMEKKNDRMLDLLQECFSEGLITINQMTKGFTRIKDGLDDLALDIPNAREKFAFYVEHANNKGWLLRSFDSPDA 686
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele22g1692 686 FunFam programmed cell death protein 4 395 549 - -
Lele22g1692 686 SUPERFAMILY ARM repeat 268 389 IPR016024 -
Lele22g1692 686 SMART ma3_7 569 678 IPR003891 -
Lele22g1692 686 SMART ma3_7 406 517 IPR003891 -
Lele22g1692 686 SMART ma3_7 272 383 IPR003891 -
Lele22g1692 686 SMART ma3_7 108 219 IPR003891 -
Lele22g1692 686 ProSiteProfiles MI domain profile. 271 392 IPR003891 -
Lele22g1692 686 PANTHER PROGRAMMED CELL DEATH 4 18 682 IPR039778 GO:0045892
Lele22g1692 686 SUPERFAMILY ARM repeat 565 681 IPR016024 -
Lele22g1692 686 Gene3D - 258 389 - -
Lele22g1692 686 Gene3D - 556 683 - -
Lele22g1692 686 Gene3D - 100 248 - -
Lele22g1692 686 Gene3D - 398 548 - -
Lele22g1692 686 SUPERFAMILY ARM repeat 105 264 IPR016024 -
Lele22g1692 686 ProSiteProfiles MI domain profile. 568 686 IPR003891 -
Lele22g1692 686 SUPERFAMILY ARM repeat 404 561 IPR016024 -
Lele22g1692 686 MobiDBLite consensus disorder prediction 1 21 - -
Lele22g1692 686 FunFam programmed cell death protein 4 99 250 - -
Lele22g1692 686 ProSiteProfiles MI domain profile. 405 526 IPR003891 -
Lele22g1692 686 FunFam Programmed cell death protein 4 257 392 - -
Lele22g1692 686 Pfam MA3 domain 407 516 IPR003891 -
Lele22g1692 686 Pfam MA3 domain 272 383 IPR003891 -
Lele22g1692 686 Pfam MA3 domain 108 219 IPR003891 -
Lele22g1692 686 Pfam MA3 domain 570 677 IPR003891 -
Lele22g1692 686 ProSiteProfiles MI domain profile. 107 228 IPR003891 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele22g1692 Lele-ChrLele22 22382196 22385322 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele22g1692 572 668 Eukaryotic Initiation Factors Gene Family AT5G57870 32.000 5.87e-09 57.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele22g1692 22 22382196 22385322 Lele22g1692 22 22382196 22385322 ECH
Lele22g1692 22 22382196 22385322 Lele23g0295 23 2023963 2029447 hybridization
Lele22g1692 22 22382196 22385322 Lele24g1659 24 22073776 22076954 hybridization