Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele22g1685 ATGAGAAAAGTGCGTGGGGACTGTGCCCACAAGTATCTTTCGATTCACGGAAAGAAGAAAAAAACATCGTCAAATGTACCTTGTTCCTTCTTCAAGGTCATGATCGGCAGCGATTTTTCTAAACTTTTGTATCTGCCTCCTAAATTTGGTCCTACAGCGTCAACCTTGGTTCACAAAGAAGCCATTATTGAGGATTCAAGTGGACAACAATGGAAGGTGAAAATATCAGTTGTCGATAAGTCTTATGCTTTTCAGGAGGGATGGGATGTTTTCTCGTCGGAACATGGGCTTCAAGTTGGACATTTTTTGGTGTTCCATTACATCGGAAGTTCACACTTTTTTGTTAAGGTTTTTGATAAATCTGGGTGTGAAAAGATTGTTTTTCCCACTCAGAGAAAGCATAAGAAGAGAAAAACGACCACAATTGACCTTGAAGCTACAGATGATTTGTTACATAGACAAGGTTTATTATCCTCGGAGTCCGATACGGGAAAAATGCAAAGCATGGAAGAGGTTGTTGGAGTGAACAATGCAGAAATTAACGAAGAGGAAACCTCAGAAAATAGTAACAGAAGGATCCAATCTTTGTACAAAGACAAAAACTATGAAGATCCTTGTTACTTGAAAGACCGAGACTTTGGAGACAAAGAAAGAGAGGACATGAGTCCTATGTTTGATGTGTTCAGGTACGAAATATTGAACAATTCAGATGTTCATGGGACTGGCAAATTTACAAGTAGAAATGAAATGGTTGTTACAAGCATTTATTCCGAAGATCCTTTGCTTGAAGAGATGTTGGGTAATGGAGCAACTCAAGAAGATCCTTTCGAAGTTGAATTAACCAAAAGAAGTCATTTTCTTGAAGAGTTAGACAAGTGTACGTTGTCCTGTGCCTGCGAGAGACATTCTTGTGGAACCAAGATTCCTGAGCATCTTTCATGTACCATGCAACATGAAGAAATCAAACAGGACAATTTCATTATGCCCAAATGGGAAGATCAAAAGTGCCAATTTGCTGGGAATTCAGGGGAAATGGAGAGGAAGATTCAAAAAGAGCTCCTGAGCATGACTCCAAATGTGTGCAGTTACAACGATAAACTCCAGTCAATTAATGGAGATCAATGCAGCAATCTCAATTCAGTGAAAGCTGAACCTTCTGACTATGGTATTCGCTCTCAAACTTCGGCAATCTCAATTGGAGCTGCCCACATGCTTGCATCCATCTCAGAGAAAAACAGTTACGACAATGTGATTGGTGGTGCTCCTTCAGGATCCAGGGAGGAGACACTGGCCGATCCTTTACCATTACCAATTTAA 1317 0.4017 MRKVRGDCAHKYLSIHGKKKKTSSNVPCSFFKVMIGSDFSKLLYLPPKFGPTASTLVHKEAIIEDSSGQQWKVKISVVDKSYAFQEGWDVFSSEHGLQVGHFLVFHYIGSSHFFVKVFDKSGCEKIVFPTQRKHKKRKTTTIDLEATDDLLHRQGLLSSESDTGKMQSMEEVVGVNNAEINEEETSENSNRRIQSLYKDKNYEDPCYLKDRDFGDKEREDMSPMFDVFRYEILNNSDVHGTGKFTSRNEMVVTSIYSEDPLLEEMLGNGATQEDPFEVELTKRSHFLEELDKCTLSCACERHSCGTKIPEHLSCTMQHEEIKQDNFIMPKWEDQKCQFAGNSGEMERKIQKELLSMTPNVCSYNDKLQSINGDQCSNLNSVKAEPSDYGIRSQTSAISIGAAHMLASISEKNSYDNVIGGAPSGSREETLADPLPLPI 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele22g1685 438 Pfam B3 DNA binding domain 30 120 IPR003340 GO:0003677
Lele22g1685 438 PANTHER B3 DOMAIN-CONTAINING 23 216 - -
Lele22g1685 438 CDD B3_DNA 29 119 IPR003340 GO:0003677
Lele22g1685 438 ProSiteProfiles B3 DNA-binding domain profile. 28 121 IPR003340 GO:0003677
Lele22g1685 438 SMART B3_2 30 121 IPR003340 GO:0003677
Lele22g1685 438 Gene3D - 23 123 IPR015300 -
Lele22g1685 438 MobiDBLite consensus disorder prediction 419 438 - -
Lele22g1685 438 SUPERFAMILY DNA-binding pseudobarrel domain 28 123 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele22g1685 Lele-ChrLele22 22292605 22295717 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele22g1685 30 153 B3 DNA Binding Superfamily AT5G66980 32.812 7.20e-13 67.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Lele22g1685 B3 1.4e-16 CL0405