Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele22g1680 ATGATAGGCCTTGGTTTCCATAATTCCTCTGTTGGGTACGTTCCCTATCCTCATTTGCTTCCTGTTTTTGAAACCAGAGCTTCTCCTCCACCTTGGACCCTTCCTTTTTCTGGAGAAACCAAAGGAAATAATAATAAGAGGTTGAAGAAATCTCCAAGCATCCCAGAAACACTTGGAGATTACAGAAGCTTTTCTTCAACCAGTGGAAGTGAAGATGGCTATGTCAGTCTCAGCAGAAGCAACAGTGTGAATAGCCTTCCAAAGCTCCATTTCAGAGACCATATATGGACTATTACTCAGAGATACCTTGCTTCTGAAGAGGCTGCACAGAAAGACATGATGATCAATCCTGAGGTTAGTGAAGCTGAAGAACAAGAAGATCGGTACTGTGCCGATGGGATGAGACTTGTTCAGCTTCTTGTTCATTGTGCTGAAGGTGTGGCTTGTCGTGATAAATCACATTCTTCAACTTTACTATCTGAACTGAGATCAAATGAATTGGTCTTTGGCTCTCCCTTTCAGCGAGTGGCTTCTTGTTTCGCCCAAGGGCTATCTGATCGGCTCAGGATGGTTCAACCGATTGGGGCTGTGGGGAATACGGAACCAATGATGAACATTATGGACATAGCCTCAGAAGAAATGGAAGAAGCATTTAAATTGGTCTATGAGATTTGCCCACATATTAAGTTTGGTCACTTTGTAGCTAATGCCACAATATTGGAAGCCTTTGAAAACCACAGCTTTGTGCATGTGGTGGACCTTGGGATGACTCTTGGTCTTCCCCATGGCCACCAATGGAGGGGACTGATTCAGAGCCTGGCTAACCGCCCAGGCCAGCCGATTCGCCGCCTCCAAATTACAGGGGTTGGCCTTTGTGTTGAGAAACTCAAGCTTATTGGTAAAGAACTTAACTTTATGCTCATAACTTGGGGATTAACCTGGAGTTCTCGCCGGTGGGAAAGAACTTGGAAAATTTGTATACTGATGACATTAAGATTCATGGCAGCGCTTCATTATTACTCTGCCGTTTTTGACTCTTTGGATGCCATGTTACCTAAGTATGACACTAAGAGAGCAAAAATAGAACAGTTCTATTTTGCAGAAAAGATAAAGAACATTGTCAGTTGTGAAGGACCGGCAAGGGAGGAGAAGCACGAGAGGGTGGACCAGTGGCGGCAGAGGATGAGTAGGGCCGGGTTGCAGGGCGCACCGATGAAGATGGTGACTCAAGCCAAGCAGTGGCTTCAGAAGAACCAGGTTTGTGATGGATATACTGTTGTGGAGGAGAAAGGTTGTTTGGTCCTTGGGTGGAAATCTAAGCCGATTGTCGCAACTTCTTGCTGGAAGTGCTGA 1353 0.4531 MIGLGFHNSSVGYVPYPHLLPVFETRASPPPWTLPFSGETKGNNNKRLKKSPSIPETLGDYRSFSSTSGSEDGYVSLSRSNSVNSLPKLHFRDHIWTITQRYLASEEAAQKDMMINPEVSEAEEQEDRYCADGMRLVQLLVHCAEGVACRDKSHSSTLLSELRSNELVFGSPFQRVASCFAQGLSDRLRMVQPIGAVGNTEPMMNIMDIASEEMEEAFKLVYEICPHIKFGHFVANATILEAFENHSFVHVVDLGMTLGLPHGHQWRGLIQSLANRPGQPIRRLQITGVGLCVEKLKLIGKELNFMLITWGLTWSSRRWERTWKICILMTLRFMAALHYYSAVFDSLDAMLPKYDTKRAKIEQFYFAEKIKNIVSCEGPAREEKHERVDQWRQRMSRAGLQGAPMKMVTQAKQWLQKNQVCDGYTVVEEKGCLVLGWKSKPIVATSCWKC 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele22g1680 450 MobiDBLite consensus disorder prediction 34 68 - -
Lele22g1680 450 Pfam GRAS domain family 332 449 IPR005202 -
Lele22g1680 450 Pfam GRAS domain family 136 304 IPR005202 -
Lele22g1680 450 ProSiteProfiles GRAS family profile. 127 449 IPR005202 -
Lele22g1680 450 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 332 444 IPR005202 -
Lele22g1680 450 MobiDBLite consensus disorder prediction 37 51 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele22g1680 Lele-ChrLele22 22266919 22268443 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele22g1680 136 449 GRAS Transcription Factor Family AT1G50600 27.368 3.13e-36 138
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Lele22g1680 GRAS 2.4e-35 CL0063