Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele22g1674 ATGGCAGCAGGGCGTGACAATGTTGTGAGAAGAGAATCTTACAAATATAGTTCCAATAAGGAATTTGATCGTTATAGTAATGGTTCTTCTGGCGTGGCAGTGTATCGATCTGGCAGCCGCCGCCCACACGTAACATATAAGAACGGTCGTAGATCTTCAGATTTAGAGGATTCAGGTCCTCGACGGATTGAGTCTTATGGTAAAAGAGAAGTGAGAGAGCAGGGTGAGTTTTACGTAGATAATGGGAAACATGCACCTGCATCTGTGTTTCAGGAAGACCATGGTGAAGCACCACCAGAGAAGCGAAGAAAAAATTCTCCAATTGTATGTGACTTAGCAGAGAAGGAAGTAAATATATCTTCTAAGAACAGGACAGCACAGGTAACTGCTTTGTCTCCCTTTTGTCCATCTCATCAAAGCTCTCATGGAGCCAGTGGTGTTTCTTATGGCGGAGTTGTTAATCCTGAGTCTCCAGCTGATTTCTCTAGTGTATTACCTCAAGGACTTTCGGGAAATGGTGGTGAATATGTTGATCAGTCTGATAAGAAACATGTGGAGGGATGGAATATCACAATGTCAAGATGGTTGTCAGATGATTATTCCCCAAGGAATGCGTCTGATGATGATTATACGCATGGAAAAGAGACATCAAGCCCAGAAAGTGGTGAATTCATATGTGAAAGTTCAGAAGGCAAAAAATCTAGATCATCAAGTAATAGTGCAGGAGGGGATTGTTGCTGCCCTTCAAGTAAAGAAGATAATAAATCCGAAAAGGAGTTACTTGTGGACACTATGGATGACGATGCGGAATATAGTGAAACTTCTAATATTAGTCACCCTTCATCAGATCCTGAAGATGGTGGAGGTTTAGCAGCGGTGCCGAGAAACATAAACAGCATCCAGAGTTGCAGAAGTGTTTTAGAATTTGAGATGATAAAGAAAATAAATGAAGGAACTTATGGTATTGTCTATAAAGCTAGGGATAAGAAGACCGGGGAAATTGTAGCATTAAAGAAGGTAAAGATGAATATGGATAGAGATGGCTTTCCATTGTCCTCTTTGAGGGAGATAAATATTCTCTCATCTTTTAATCATCCTTCTATTGTGGAAGTTAAAGAAGTGTTGGTGGATGATTTTGATTATGTTTTTATGGTAATGGAGTATATGGAGTATGACCTCAAAGGGCTGATACAGATGATGAAGCGGCCCTTTAGTATAGGTGAAATAAAATCCTTGATGATGAAACTTCTCAAAGGTGTCAAGTATCTTCATGACAATTGGGTTCTTCACAGAGATTTGAAGACATCAAATATTCTCTTAAATAAAGAGGGTGAGCTGAAAATATGTGATTTTGGTTTATCTCGTCATTATGGAAGCCCGCTCAAGCCGTATACTCCTCTTGTGGTTACGCTATGGTACAGGGCTCCTGAACTTCTGCTAGGTGCTAAAGAATACTCAACAGCGATTGATATGTGGTCAGTTGGTTGCATAATGGCTGAATTGGTTGCAAAGTCACCTCTATTCCGAGGAAAATCTGAAATTGAGCAGATTAATAACATTTTCCAAACCCTGGGCACACCTAATGAGAAAATTTGGCCAGGAGTATCCAAATTATCTGGATTCAAGGCAAACTTTGTTAAGCAGCCGTACAATCTGTTGCGGAAGAAGTTTCCAGTTGCATCCTTCATTGGATCCCCTGTTCTTTCTGAATTGGGATTTGACTTGTTGAGCAAGCTTTTAAGTTATGACCCTGAAAAGAGGATATCTGCAGAAGCTGCTCTTCTTCATGACTGGTTCCATGAAGCCCCTCTTCCTAATTCTGACGTCAAGATCACATTACCTCCACAGCGCTGCTAG 1857 0.4071 MAAGRDNVVRRESYKYSSNKEFDRYSNGSSGVAVYRSGSRRPHVTYKNGRRSSDLEDSGPRRIESYGKREVREQGEFYVDNGKHAPASVFQEDHGEAPPEKRRKNSPIVCDLAEKEVNISSKNRTAQVTALSPFCPSHQSSHGASGVSYGGVVNPESPADFSSVLPQGLSGNGGEYVDQSDKKHVEGWNITMSRWLSDDYSPRNASDDDYTHGKETSSPESGEFICESSEGKKSRSSSNSAGGDCCCPSSKEDNKSEKELLVDTMDDDAEYSETSNISHPSSDPEDGGGLAAVPRNINSIQSCRSVLEFEMIKKINEGTYGIVYKARDKKTGEIVALKKVKMNMDRDGFPLSSLREINILSSFNHPSIVEVKEVLVDDFDYVFMVMEYMEYDLKGLIQMMKRPFSIGEIKSLMMKLLKGVKYLHDNWVLHRDLKTSNILLNKEGELKICDFGLSRHYGSPLKPYTPLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIMAELVAKSPLFRGKSEIEQINNIFQTLGTPNEKIWPGVSKLSGFKANFVKQPYNLLRKKFPVASFIGSPVLSELGFDLLSKLLSYDPEKRISAEAALLHDWFHEAPLPNSDVKITLPPQRC 618
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele22g1674 618 SUPERFAMILY Protein kinase-like (PK-like) 308 605 IPR011009 -
Lele22g1674 618 ProSiteProfiles Protein kinase domain profile. 309 599 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele22g1674 618 SMART serkin_6 309 599 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele22g1674 618 MobiDBLite consensus disorder prediction 20 34 - -
Lele22g1674 618 Gene3D Phosphorylase Kinase; domain 1 294 390 - -
Lele22g1674 618 CDD STKc_CDC2L1 303 599 IPR045267 GO:0004674|GO:0005524|GO:0006468
Lele22g1674 618 MobiDBLite consensus disorder prediction 160 180 - -
Lele22g1674 618 MobiDBLite consensus disorder prediction 269 292 - -
Lele22g1674 618 FunFam Cyclin-dependent kinase G-2 391 617 - -
Lele22g1674 618 MobiDBLite consensus disorder prediction 87 105 - -
Lele22g1674 618 ProSitePatterns Serine/Threonine protein kinases active-site signature. 428 440 IPR008271 GO:0004672|GO:0006468
Lele22g1674 618 Pfam Protein kinase domain 309 599 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele22g1674 618 MobiDBLite consensus disorder prediction 1 69 - -
Lele22g1674 618 MobiDBLite consensus disorder prediction 47 69 - -
Lele22g1674 618 MobiDBLite consensus disorder prediction 197 252 - -
Lele22g1674 618 MobiDBLite consensus disorder prediction 85 105 - -
Lele22g1674 618 MobiDBLite consensus disorder prediction 201 216 - -
Lele22g1674 618 MobiDBLite consensus disorder prediction 231 245 - -
Lele22g1674 618 PANTHER CELL DIVISION PROTEIN KINASE 308 605 - -
Lele22g1674 618 FunFam cyclin-dependent kinase G-2 isoform X1 294 390 - -
Lele22g1674 618 Gene3D Transferase(Phosphotransferase) domain 1 391 610 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele22g1674 Lele-ChrLele22 22223391 22225711 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele22g1674 300 605 Core Cell Cycle Gene Families AT5G10270 45.963 6.11e-86 275
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-PITSLRE Lele22g1674 Pkinase 1.3e-72 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele22g1674 22 22223391 22225711 Lele23g0316 23 2212016 2214358 hybridization
Lele22g1674 22 22223391 22225711 Lele24g1639 24 21934093 21936411 hybridization