Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele22g1668 ATGGCTAGCTGTAGTTCTCTTTCATTGTGTCCGTACATCCTTTATCGTCACCCGAACCCAAAAAGACGTCCCATTTTCTGCTCGGTTGGCTCTTCTTCGCTCGTAGGCATTGATGGATCTAAAGTACCCCGCAAAAGATCAAGAAAAATTGAAGGTCCTGGAAAAAGCATGGAAGACTCTGTTCAACGCAAGATGGAGCAATTTTATGAAGGATCTAATGGGCCACCCCTGCGAGTTCTTCCCATTGGTGGGTTGGGTGAAATTGGGATGAATTGCATGCTTGTTGGGAACCATGATCGTTATATCCTTATTGATGCTGGTGTCATGTTCCCAGACTATGATGAGCTTGGAGTCCAAAAGATTATACCTGATACAACATTTATAAGAAAATGGAGGCACAAAATTGAAGCAGTTGTTGTAACGCATGGTCATGAAGATCATATCGGTGCTTTGCCTTGGGTCATACCAGCATTGGATACCCATACCCCAATTTTTGCATCTTCCTTTACAATGGAGCTTATTAGGAAACGTTTGAAGGAGCATGGTATTTTTGTTCCATCAAGACTCAAAGTATTTCGAACAAGGAAGAAGTTTATGGCCGGGCCATTTGAAATAGAGCCTATCAGGGTGACCCATTCTATCCCTGATTGTTGTGGATTAGTTCTTCGCTGTTCTGATGGTACTATTCTTCATACTGGGGACTGGAAGATAGATGAATCACCACTAGATGGTAAAGTTTTTGACCGTGAAGTTTTAGAGGAACTCTCTAAAGAAGGAGTAACATTAATGATGAGTGATTCAACAAACATACTTTCACCTGGAAGAACAATTAGCGAATCCTCTGTGGCAGATGCACTGTTAAGGCATATTTCTGCTGCTAAAGGAAGGGTTATTACAACCCAGTTTGCATCAAATATACATCGTCTTGGAAGTGTGAAAGCTGCAGCTGATTTAACTGGTAGAAAAATGGTGTTTGTTGGCATGTCTTTACGGACATATCTAGATGCAGCTTGGAAGGATGGAAAGGCACCATTTGATCCATCCGCCCTGGTGAAAGTGGAGGATATTGATGCTTATGCTCCTAAGGATCTGCTTATTGTAACAACTGGATCTCAGGCAGAACCTCGTGCTGCCTTGAATCTTGCATCATATGGTGGTAGTCATTCTTTCAAACTGACCAAGGAAGATATAATTTTGTATTCAGCTAAGGTTATCCCTGGTAATGAGTCTCGTGTGATGAAAATGATGAACCGCATATCAGAGATTGGATCATCAATAGTAATGGGGAAGAATGAGGGGCTGCACACATCTGGTCATGCGTACCGTGGAGAATTGGAGGAAGTACTTAGAATAGTGAAACCGCAACATTTTCTTCCGATTCATGGAGAACTCTTGTTCCTAAAGGAGCATGAATTACTTGGAAAGTCAACTGGCATTCGACACACTACTGTTATTAAGAATGGAGAGATGCTTGGCGTTTCACACTTAAGAAACAGAAGAATCCTTTCCAATGGCTTTGTTTCCCTTGGAAAAGAGAATTTACAGTTGAAGTACAGTGATGGGGACAAAGCATTTGGTACATCAAGCGAACTTTTCGTTGATGAAAGATTGAGAATTGCTTTAGATGGAATTATTGTGGTCAGCATGGAAATATTTCGCCCTGAAAATAGTGAGAGTCATGTTGAAAACACCTTAAAAGGGAAGATAAGAATTACCACAAGATGCCTGTGGCTTGACAAAGGAAAGCTGTTGGATGCGCTTCATAAAGCTGCTCATGCTGCACTTTCAAGCTGCCCGGTAAACTGTCCATTGGCTCACATGGAAAGAACTGTATCTGAGTTATTGAGGAAGTTGGTGAGGAAGTATAGTGGCAAAAGACCAGAAGTTATTGCTATTGCTATTGAAAACCCTGCCGCTGTTCTTGCTGATGAGGTAAAATCAAAGCTGTCAGGAAAATCTCATATGGGTCTTGAGACACCATCATTCAGAAAAGCTGTGGATGGACGTAAAGAGGAAAAGATGTCCAGTAAAATGCCAATAAAAGGAGATGATGGCACTGATGTTGAAGGACTCCTTCCTGAGGAAGATATCCCTACTCCAAGTGGAGCTGAGGGTGATTTCCCTGATTCAGAGGATTCAGATGAATTTTGGAAATCATTCATCACACCTTCAACCGTGGAAAAGTCAATCAAGACTAACAATGGTTATATTCCACGAAAGCAGCAAGAGTCCCAGCTGATAAAAGATGATTCTACAGGCTCTGAAAAAGGCGAGTCTGAATCAAAGCCTTCAAAAACAGTGAAGAGAAATAAATGGAAACCTGAGGAAGTGAATAAGCTGATCGATATGCGTGGGGAGCTGAACGATAGATTTCAAGTTGTGAAGGGAAGAATGATCCTCTGGGAGGAGATATCTCAAAAGTTGTTGGCTGATGGTATCAAAAGAAGTCCAGGGCAATGTAAATCTCTATGGACATCTTTGATACAAAAATATGAGGAGATCAAGAATGAGAAGAAGAGCAAGAAAAGCTGGCCATATCTGGAGGACATGGACAGGATATTGTCGGGTGCTAACAGCAAAATGAGCGAGAAATTGTGA 2598 0.4161 MASCSSLSLCPYILYRHPNPKRRPIFCSVGSSSLVGIDGSKVPRKRSRKIEGPGKSMEDSVQRKMEQFYEGSNGPPLRVLPIGGLGEIGMNCMLVGNHDRYILIDAGVMFPDYDELGVQKIIPDTTFIRKWRHKIEAVVVTHGHEDHIGALPWVIPALDTHTPIFASSFTMELIRKRLKEHGIFVPSRLKVFRTRKKFMAGPFEIEPIRVTHSIPDCCGLVLRCSDGTILHTGDWKIDESPLDGKVFDREVLEELSKEGVTLMMSDSTNILSPGRTISESSVADALLRHISAAKGRVITTQFASNIHRLGSVKAAADLTGRKMVFVGMSLRTYLDAAWKDGKAPFDPSALVKVEDIDAYAPKDLLIVTTGSQAEPRAALNLASYGGSHSFKLTKEDIILYSAKVIPGNESRVMKMMNRISEIGSSIVMGKNEGLHTSGHAYRGELEEVLRIVKPQHFLPIHGELLFLKEHELLGKSTGIRHTTVIKNGEMLGVSHLRNRRILSNGFVSLGKENLQLKYSDGDKAFGTSSELFVDERLRIALDGIIVVSMEIFRPENSESHVENTLKGKIRITTRCLWLDKGKLLDALHKAAHAALSSCPVNCPLAHMERTVSELLRKLVRKYSGKRPEVIAIAIENPAAVLADEVKSKLSGKSHMGLETPSFRKAVDGRKEEKMSSKMPIKGDDGTDVEGLLPEEDIPTPSGAEGDFPDSEDSDEFWKSFITPSTVEKSIKTNNGYIPRKQQESQLIKDDSTGSEKGESESKPSKTVKRNKWKPEEVNKLIDMRGELNDRFQVVKGRMILWEEISQKLLADGIKRSPGQCKSLWTSLIQKYEEIKNEKKSKKSWPYLEDMDRILSGANSKMSEKL 865
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele22g1668 865 MobiDBLite consensus disorder prediction 743 771 - -
Lele22g1668 865 SUPERFAMILY Metallo-hydrolase/oxidoreductase 77 491 IPR036866 -
Lele22g1668 865 MobiDBLite consensus disorder prediction 663 688 - -
Lele22g1668 865 Gene3D - 278 428 IPR042173 -
Lele22g1668 865 MobiDBLite consensus disorder prediction 731 771 - -
Lele22g1668 865 Gene3D - 81 493 IPR036866 -
Lele22g1668 865 MobiDBLite consensus disorder prediction 652 714 - -
Lele22g1668 865 SMART Lactamase_B_5a 89 286 IPR001279 -
Lele22g1668 865 Pfam Zn-dependent metallo-hydrolase RNA specificity domain 434 475 IPR011108 -
Lele22g1668 865 CDD GT1 770 835 - -
Lele22g1668 865 Pfam Myb/SANT-like DNA-binding domain 769 853 IPR044822 -
Lele22g1668 865 SMART sant 768 830 IPR001005 -
Lele22g1668 865 CDD RNaseJ_MBL-fold 80 491 - -
Lele22g1668 865 ProSiteProfiles Myb-like domain profile. 764 828 IPR001005 -
Lele22g1668 865 PANTHER RIBONUCLEASE J 1 859 - -
Lele22g1668 865 Pfam Beta-lactamase superfamily domain 100 236 IPR001279 -
Lele22g1668 865 Gene3D - 772 833 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele22g1668 Lele-ChrLele22 22188587 22196177 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele22g1668 771 861 Trihelix Transcription Factor Family AT2G38250 33.333 9.98e-11 62.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Lele22g1668 Lactamase_B_2 1.3e-10 CL0381