Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele22g1646 ATGAGGTCTACGGAAAACAGCAAGAAAAAGAAAAAGAAAACCTCTACAGCAAAAGTTTCTCTATATGCGTCGCCCAAAAAGTCTCGATACGCCCTGATCGCGAGACACAACCGTCAACGTAGAAGCCGATCGCACCATTCATCATTCTTCCTTCTTCATCAACGAATACGATCAACAATGGAGAATCACCAGCAAGCTCCACCCTCCTCCGCATACCCACCTCAACCTCCTGCTCCTCCTTCTTCCTTCCATCACCTTCTTCAACAGCAACAACTCCAGCTTCACACCTTCTGGAACACCCAGCGCCAAGAGATCGAACATGTAAACGATTTCAAGAACCACCAGCTCCCTCTCGCTCGCATCAAGAAGATCATGAAGGCCGACGAGGACGTCCGCATGATCTCCGCCGAAGCCCCCATTTTGTTCGCCAAGGCCTGCGAGCTCTTCATCCTCGAGCTTACCATTCGATCCTGGATCCACGCCGAAGAGAACAAGAGGCGCACTCTCCAGAAGAACGACATCGCTGCTGCCATCACACGCACTGATATTTTCGATTTCTTGGTTGATATTGTGCCTAGGGACGAGATCAAGGACGAGGCTGCCCTTGGTGGAATGATGGCGACCCCCGCCAGCGGTATTCCTTACTACTATCCGTCTATGGGCCAACCTGCCGGCGCTCCTGGTGGCATGTTGATTGGACGGCAGGCGGTGGATCCCACCGGATTGTACGCGCAACCGCCTTCGCAAGCGTGGCAGTCAGTGTGGCAGATGACACCGGATGATGGGTCCTACGGAAGCGGCGGGAGCAGTGGACAGGGCAATCTGGACGGTCAGAGTTGA 840 0.5369 MRSTENSKKKKKKTSTAKVSLYASPKKSRYALIARHNRQRRSRSHHSSFFLLHQRIRSTMENHQQAPPSSAYPPQPPAPPSSFHHLLQQQQLQLHTFWNTQRQEIEHVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWIHAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPRDEIKDEAALGGMMATPASGIPYYYPSMGQPAGAPGGMLIGRQAVDPTGLYAQPPSQAWQSVWQMTPDDGSYGSGGSSGQGNLDGQS 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele22g1646 279 Pfam Core histone H2A/H2B/H3/H4 83 178 IPR007125 GO:0003677
Lele22g1646 279 MobiDBLite consensus disorder prediction 243 279 - -
Lele22g1646 279 SUPERFAMILY Histone-fold 69 187 IPR009072 GO:0046982
Lele22g1646 279 Gene3D Histone, subunit A 81 193 IPR009072 GO:0046982
Lele22g1646 279 MobiDBLite consensus disorder prediction 61 83 - -
Lele22g1646 279 FunFam Nuclear transcription factor Y subunit gamma 84 193 - -
Lele22g1646 279 MobiDBLite consensus disorder prediction 245 279 - -
Lele22g1646 279 MobiDBLite consensus disorder prediction 1 16 - -
Lele22g1646 279 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 68 205 - -
Lele22g1646 279 MobiDBLite consensus disorder prediction 1 27 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele22g1646 Lele-ChrLele22 22020291 22024379 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele22g1646 81 279 CCAAT-HAP5 Transcription Factor Family AT3G48590 84.390 5.29e-106 306
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Lele22g1646 Histone 4.1e-17 CL0012