Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele22g1629 ATGGATGATGGCTGCCAGCATGAAAATGGTAGGCATAAGGTGGACTATTACAGAGGAGCACATTCCCCGTTGAATATGGCTCCTCAACATCAAGCAAAGGAACCAAATGCCTTAGTTATGAATAAGAAAATTATGTCCATCATAGCTGAAAGGGAGGCTGCTATTCGAGAACGAAATGCAGCTTTATCTGAAAAGAATGAAGCCTTGGCTGCTCGAGATGAGGCCCTTCGGCAGAGGGATGAAGCACTTGTTCAGAGGGATAGTGCCATAATGGAACGAGATAATGCCATTGCTGCCCTTCAAGTCCGGGACAATGCTGTCAACTTCCAATTGGGTAGTGGAATTCAACGTGGATCGAAGCGAATGCACCCTTCCTCAAACCATCTTGTTGAAATGGCAGAAGCTGCATACAGCACAAAGGATACTACCATAACCGAGGCCTTCCCAGTGACCGTAATAAATTCTGAAGCCGTTAAATCTCATCAGGCAAAGAGAAAAAAGGAAGACAAGGCAATTTCTTCTAAGGCGTTGAAGAGCAGAGGAAAGAAAATGGGTGAGGATTTAAATAGGTCGGCTTCTTCTGAGGGAACTAAAATTAAATCTGAGTGGGATAGACAGGACATTGGCTTGAATTTGGTTACATTTGATGAAACAACCATGCCGGCCCCAGTCTGCACATGCACTGGAGTACCACGGCAGTGCTACAAATGGGGAAACGGAGGATGGCAGTCATCCTGTTGTACCACCTCCTTGTCAATGTATCCATTGCCACAGCTTCCAAACAAGCGCCATTCTCGAATCGGTGGCCGAAAGATGAGTGGAAGTGTCTTTACAAGACTACTCAGTAGGGTAGCAGCAGAAGGCCAAGATTTATCTATACCATTGGATCTCAAGGACTACTGGGCCAGACATGGGACAAATCGCTACATCACAATCAAGTAG 942 0.4575 MDDGCQHENGRHKVDYYRGAHSPLNMAPQHQAKEPNALVMNKKIMSIIAEREAAIRERNAALSEKNEALAARDEALRQRDEALVQRDSAIMERDNAIAALQVRDNAVNFQLGSGIQRGSKRMHPSSNHLVEMAEAAYSTKDTTITEAFPVTVINSEAVKSHQAKRKKEDKAISSKALKSRGKKMGEDLNRSASSEGTKIKSEWDRQDIGLNLVTFDETTMPAPVCTCTGVPRQCYKWGNGGWQSSCCTTSLSMYPLPQLPNKRHSRIGGRKMSGSVFTRLLSRVAAEGQDLSIPLDLKDYWARHGTNRYITIK 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele22g1629 313 PANTHER - 26 313 IPR010409 -
Lele22g1629 313 Pfam GAGA binding protein-like family 1 313 IPR010409 -
Lele22g1629 313 MobiDBLite consensus disorder prediction 161 198 - -
Lele22g1629 313 SMART GAGA_bind_2 1 313 IPR010409 -
Lele22g1629 313 Coils Coil 59 79 - -
Lele22g1629 313 MobiDBLite consensus disorder prediction 161 189 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele22g1629 Lele-ChrLele22 21852056 21853100 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele22g1629 1 313 BBR or BPC Transcription factor family AT2G21240 60.317 1.25e-134 382
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BBR-BPC Lele22g1629 GAGA_bind 3.6e-99 No_clan