Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele22g1628 ATGAAAGAATCGGAGAATGATATTCTCAACGCCTCCATTCGGCTTCTTTCTTCTCTTCTGGATGAGATTCCCACTGTTGTTAACTTTAAAGGTAAATGGTCTCTAATTAGAGCCAAACTCTTCGATCTTCAGACTCAGCTCACTGATTTCTCCTCTGAGTTTCCCCATTACTCGTCCAATGCTCTATCACTCGAGCTACTCCAGTCCATTTCGCACTCCCTAAACGATGCCGTTTCGCTTGCCAAAGAATGTCAGTCCCCCAACTTATCCCAGGGGAAGCTTAAGACTCAGAGCGACATTGATTCAGTCCTCGCTAAGCTGGATCGCCATGTTAAAGACTGCGAGATTCTGTTCAGGAGTGGGGTCTTGCAAGACGCGGCCGTTTCTAGCGCGTCTAAGAGAGAGGCCGTACGGTCTGAATCCAGGAACTTGATTACTCGTCTGCAAATCGGTTCTGCAGAGTCCAGGAAGTCAGCAATGGACTCCTTGTTGGGTTTACTCGAAGAGGATGATAAGAATGTGATGATAGCTGTGGCGCAGGGTGTGGTTCCAGTGCTTGTCCGTTTACTGGATTCTGCCTCCCCCGAGATGAAGGAGAATACTGTTGCTGCCATCTCCAGAGTCTCCATGGTAGATAGTAGCAAGCATGTTTTGATCGCTGAGGGTTTGTTGCTATTGAATCAATTGGTCCGAGTTCTGGATTCGGGGAGTGGATTTGCCAAACAGAAATCCTGCATAGCCCTCCAGGCTCTAAGTTTCTCCAAAGAGAATGCTAGAGCAATTGGGTCTGGAGGTGGAATCTCGTCACTATTAGAGATTTGTCAATCCGGCACTCCTGGTTCCCAAGCTTCGGCAGCAGGGGTTTTAAGAAATCTCTCTGTCTTCCCTGAAATTAGAGAGAATTTTATCGAGGAAAACACCATTGATGTTCTATTGGGGCTCGCCTCATCGGGAACTGTGTTAGCGCAAGAAAATGCACTTGGGTGTTTGTCCAACTTAGTTTCTGAGGACGAAAGTTTAAAACTTTTGTTTGTGAAGGAAGGAGGGATCGAGTGCCTGAAGAATTTTTGGGACTCAGCTCCGACAGTTCGGAGTCTGGAAGTCGCAGCTGAGTTGTTGAGTCACCTGGCTTCTAGTTCACCGATTGCTGACGTCCTTGTTTCTGATGGGTTTATACTCCGCCTTGTGGGTGTGTTGAATTGTGGAATTCTAGGGGTGAGAACTGCGGCCGCTCGAGCTGTTTATGCTTTGGGGTTGTACAACACAAAATCTAGGAAGGAGATTGGTGAATGTGGATGTATGACCCCATTGATCAAGATGCTGGATGGCAAAGCTATAGAAGAGAAAGAAGCAGCCGCGAAAGCGTTGTCGGTGCTCATGTTGTATGCGGCCAATAGAAAAATTTTCCGGAAGGACGAGAGGGGTATAGCTAGTGCTGTTCAGCTGTTGGATCCTTCAATACAGAATTTGGATAAAAAATATCCTGTTTTAGTGCTGACCTCGCTTGTGCATTCAAAGAAATGTAGGAAACATATGGTGGCTGCCGGTGCTTGTGTATATACGCAGAAACTTGTTGAGATCGATGTTGAGGGTGCCAACAAACTGTTGGATAGCCTTGGTAGTGGTAAGATATGGGGAGTTTTTGCAAGACCCTAA 1656 0.4668 MKESENDILNASIRLLSSLLDEIPTVVNFKGKWSLIRAKLFDLQTQLTDFSSEFPHYSSNALSLELLQSISHSLNDAVSLAKECQSPNLSQGKLKTQSDIDSVLAKLDRHVKDCEILFRSGVLQDAAVSSASKREAVRSESRNLITRLQIGSAESRKSAMDSLLGLLEEDDKNVMIAVAQGVVPVLVRLLDSASPEMKENTVAAISRVSMVDSSKHVLIAEGLLLLNQLVRVLDSGSGFAKQKSCIALQALSFSKENARAIGSGGGISSLLEICQSGTPGSQASAAGVLRNLSVFPEIRENFIEENTIDVLLGLASSGTVLAQENALGCLSNLVSEDESLKLLFVKEGGIECLKNFWDSAPTVRSLEVAAELLSHLASSSPIADVLVSDGFILRLVGVLNCGILGVRTAAARAVYALGLYNTKSRKEIGECGCMTPLIKMLDGKAIEEKEAAAKALSVLMLYAANRKIFRKDERGIASAVQLLDPSIQNLDKKYPVLVLTSLVHSKKCRKHMVAAGACVYTQKLVEIDVEGANKLLDSLGSGKIWGVFARP 551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele22g1628 551 Pfam Armadillo/beta-catenin-like repeat 170 206 IPR000225 GO:0005515
Lele22g1628 551 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 5 549 - -
Lele22g1628 551 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 181 223 IPR000225 GO:0005515
Lele22g1628 551 SUPERFAMILY ARM repeat 143 489 IPR016024 -
Lele22g1628 551 SMART arm_5 254 294 IPR000225 GO:0005515
Lele22g1628 551 SMART arm_5 421 461 IPR000225 GO:0005515
Lele22g1628 551 SMART arm_5 170 210 IPR000225 GO:0005515
Lele22g1628 551 SMART arm_5 337 378 IPR000225 GO:0005515
Lele22g1628 551 SMART arm_5 379 419 IPR000225 GO:0005515
Lele22g1628 551 SMART arm_5 295 335 IPR000225 GO:0005515
Lele22g1628 551 Gene3D - 364 527 IPR011989 -
Lele22g1628 551 Gene3D - 89 363 IPR011989 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele22g1628 Lele-ChrLele22 21844801 21846456 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele22g1628 126 410 U-box Gene Family AT2G23140 26.990 4.11e-16 79.7