Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele22g1624 ATGGCTCCGTCCGACGAGTCTCGTCTCTATCTTGTCCCTGAATTTCTTTACTCATCACCGTTATCATCGAAGAGGCTCTTCCATCTAGATACCTTGATGAAGAAGGATCACAGCTTGTCACCACCGCCAACATCCTCTGTTGTGTCGAATTCATCATCGCCGGGAAAAAGTTTTGTGATCCCATCCCCCAGCGAGAAGATCGAGTTGTTTTCTCCGGCTTACTACGCCGCATGTGGAGTCGGAGGGTCGTTGTGTACTGGTCTTACCCACATGGCCGTCACTCCTCTCGATGTCGTCAAGTGTAACATGCAGATTGATCCAGCAAAGTATAAGAGCACCATGTCAGGATTTGGCGTTATTGTGAGGGAGCAGGGTGTGAGGGGTCTTTTTAAGGGTTGGGCGCCAACTTTGGTGGGTTACAGTGCACAGGGAGCTTGCAAGTATGGATTCTATGAGTTCTTCAAGAAGTACTACTCAGACATTGCTGGGCCTGAGTATGCAGCCAAGTATAAGACATTGATATACCTTGCTGGTTCAGCTTCTGCAGAGGTTATTGCTGATGTCGCCCTTTGCCCCATGGAAGCCGTCAAAGTTCGCGTTCAAACTCAGCCCGGCTTTGCTCGTGGCTTAACAGATGGTCTCCCCAAGATTGTCAGAGCTGAAGGTGCTCTTGGGTTGTACAAGGGACTTGTTCCTCTATGGGGGCGTCAGATTCCATATACGATGATGAAATTTTCTTCTTTTGAGAATATTGTGGAGATGATGTACAAACATGTCATCCCTACCCCTAAAGAGCAGTGCAGCACTGGTGTGCAGCTGGGAGTGAGTTTTGCAGGAGGATATGTGGCTGGCATATTCTGTGCACTGGTTTCTCACCCTGCTGATAATCTTGTTTCTTTTCTTAACAATGCCAAGGGAGCCACCGTTGGTGATGCTGTGAAGAATTTGGGGCTGTGGGGTCTTTTCACACGAGGCCTTCCTCTTCGCATAGTTATGATTGGAACGCTGACAGGAGCACAATGGGGAATCTATGATTCCTTCAAAGTTTTTGTGGGACTGCCTACAACTGGTGGAGCTCCCACTCCCGCTGCCGCAGTGGTTGCTAATGCCTGA 1113 0.4897 MAPSDESRLYLVPEFLYSSPLSSKRLFHLDTLMKKDHSLSPPPTSSVVSNSSSPGKSFVIPSPSEKIELFSPAYYAACGVGGSLCTGLTHMAVTPLDVVKCNMQIDPAKYKSTMSGFGVIVREQGVRGLFKGWAPTLVGYSAQGACKYGFYEFFKKYYSDIAGPEYAAKYKTLIYLAGSASAEVIADVALCPMEAVKVRVQTQPGFARGLTDGLPKIVRAEGALGLYKGLVPLWGRQIPYTMMKFSSFENIVEMMYKHVIPTPKEQCSTGVQLGVSFAGGYVAGIFCALVSHPADNLVSFLNNAKGATVGDAVKNLGLWGLFTRGLPLRIVMIGTLTGAQWGIYDSFKVFVGLPTTGGAPTPAAAVVANA 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele22g1624 370 PANTHER SOLUTE CARRIER FAMILY 25 (MITOCHONDRIAL CARRIER PHOSPHATE CARRIER), MEMBER 3, LIKE-RELATED-RELATED 48 360 IPR044677 GO:0005315|GO:1990547
Lele22g1624 370 SUPERFAMILY Mitochondrial carrier 74 345 IPR023395 -
Lele22g1624 370 Pfam Mitochondrial carrier protein 76 159 IPR018108 -
Lele22g1624 370 Pfam Mitochondrial carrier protein 174 258 IPR018108 -
Lele22g1624 370 ProSiteProfiles Solute carrier (Solcar) repeat profile. 170 254 IPR018108 -
Lele22g1624 370 ProSiteProfiles Solute carrier (Solcar) repeat profile. 73 157 IPR018108 -
Lele22g1624 370 Gene3D Mitochondrial carrier domain 46 163 IPR023395 -
Lele22g1624 370 Gene3D Mitochondrial carrier domain 164 353 IPR023395 -
Lele22g1624 370 FunFam Phosphate carrier protein, mitochondrial 73 351 - -
Lele22g1624 370 ProSiteProfiles Solute carrier (Solcar) repeat profile. 271 350 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele22g1624 Lele-ChrLele22 21792621 21794763 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele22g1624 4 366 Chloroplast and Mitochondria Gene Families AT3G48850 70.799 0.0 531