Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele22g1623 ATGATAATCAGATTCAGAATAGAGAGAGAGTCTCTGGCCCACCACGTGGCCCCCACCTTCAACACTCCTTCTCTTCTCTCTCTATTTTGTCTCAGACATTCTTGTTTAAATTCACCATCCCTCTCTCAGGTTGTTTCGTACTCGACGACGCTGCTTTGCCTCTTCTCTATTTGTGAGCTCATGAACTGGCCAATATGGCGGAAATGGAAGGCCTTGGCCTTGGCCATGGCTATAACGGCGTCGTTTCAGATGAGTATTTGCTTGGATGCTCATTCTCTTTCTTCGCTTGGAGATGCAATTCTCAGGCTTCCTGGCCAGCCCCAAGTTCGTTTTCAACAGTTCTCAGGATACGTTGGAGTTGACGATAAGAATGAGAAGGCTCTGTTCTACTATTTTGTTGAATCGGACACCGATCCTTCTTCCAAGCCTCTGGTTCTCTGGCTCAATGGAGGGCCTGGTTGTTCTTCCTTGGGAGTAGGTGCATTCTCTGAAAATGGGCCTTTCCGGCCAAATGGGGAAGTTTTAATCGAAAACAAGTCTAGTTGGAACAAAGAAGCAAACGTGTTGTATTTGGAGACACCAGTTGGAGTGGGTTTCTCTTATGCCAAAGGAAGCTCCTCCCATTTGACAGTAAACGACGAGGCAACAGCCAGAGATAACCTTGTATTCCTGATACGCTGGTTCAGCAAATTCCCCCACTACAGGCACAGAGACTTGTTTCTGACAGGGGAAAGTTATGCAGGGCATTATGTTCCTCAACTTGCAAAGCTCATGATTGAGATGAACAAAAAGGAGAAGTTATTCAATCTTAAAGGCGTAGCTTTGGGTAATCCACTTCTAGAATATGCCACGGACTTCAATTCAAGAGCTGAGTTCTTCTGGTCTCATGGATTGATATCAGATTCAACGTACAAAATGTTCACTAAAGTGTGTAATTATTCTCAGTACGTTAGTGAATACTATAGAGACTCAGTTTCGCCTCTTTGTTCAAAGGTTATGCACCAAGTAGGGAGAGAAACCAGTAAATTTGTGGACAAGTACGATGTTACCCTTGATGTTTGTATTTCATCAGTGCTTTCACAGTCCAAGGTTATTTGTCCTCAAACTGAACAAGCAAACGAGATGGTAGATGTATGCGTGGATGACAAAGTTACAAATTATTTAAACCAAAAAGATGTACGTGAGGCTCTTCATGCCAGGCTTGTTGGAGTTCGCAAGTGGGATGTCTGCAGCAACATTCTGGACTATGATATGCTCAACCTAGAAGTGCCTACCCTCCCTCTCATTGGATCACTAATAAAAGTCGGAGTTCAGGTCTTAATTTACAGTGGAGATCAAGATTCTGTTCTTCCTCTGACTGGTAGCCGCACCTTGGTTCAAAAACTGGCAAGGAAATTAGAACTAAATACAACAGTACCTTACAGAGTTTGGTTTGCAGGCCAGCAGGTTGGTGGGTGGACTCAAGTTTATGGAAATATCCTCTCATTTGCCACCGTGAGAGGAGCCTCCCATGAAGTTCCTTTCTCACAGCCTGAGAGATCCCTTGTGCTCTTCAAGTCATTCTTGGAAGGCAGGCCTCTACCTGATAGAATCTTGACACAAAGTTAA 1608 0.4415 MIIRFRIERESLAHHVAPTFNTPSLLSLFCLRHSCLNSPSLSQVVSYSTTLLCLFSICELMNWPIWRKWKALALAMAITASFQMSICLDAHSLSSLGDAILRLPGQPQVRFQQFSGYVGVDDKNEKALFYYFVESDTDPSSKPLVLWLNGGPGCSSLGVGAFSENGPFRPNGEVLIENKSSWNKEANVLYLETPVGVGFSYAKGSSSHLTVNDEATARDNLVFLIRWFSKFPHYRHRDLFLTGESYAGHYVPQLAKLMIEMNKKEKLFNLKGVALGNPLLEYATDFNSRAEFFWSHGLISDSTYKMFTKVCNYSQYVSEYYRDSVSPLCSKVMHQVGRETSKFVDKYDVTLDVCISSVLSQSKVICPQTEQANEMVDVCVDDKVTNYLNQKDVREALHARLVGVRKWDVCSNILDYDMLNLEVPTLPLIGSLIKVGVQVLIYSGDQDSVLPLTGSRTLVQKLARKLELNTTVPYRVWFAGQQVGGWTQVYGNILSFATVRGASHEVPFSQPERSLVLFKSFLEGRPLPDRILTQS 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele22g1623 535 FunFam Carboxypeptidase 93 528 - -
Lele22g1623 535 PRINTS Carboxypeptidase C serine protease (S10) family signature 494 507 IPR001563 GO:0004185|GO:0006508
Lele22g1623 535 PRINTS Carboxypeptidase C serine protease (S10) family signature 191 201 IPR001563 GO:0004185|GO:0006508
Lele22g1623 535 PRINTS Carboxypeptidase C serine protease (S10) family signature 227 252 IPR001563 GO:0004185|GO:0006508
Lele22g1623 535 PRINTS Carboxypeptidase C serine protease (S10) family signature 178 190 IPR001563 GO:0004185|GO:0006508
Lele22g1623 535 FunFam Carboxypeptidase 425 524 - -
Lele22g1623 535 SUPERFAMILY alpha/beta-Hydrolases 103 528 IPR029058 -
Lele22g1623 535 Pfam Serine carboxypeptidase 104 524 IPR001563 GO:0004185|GO:0006508
Lele22g1623 535 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 100 511 IPR001563 GO:0004185|GO:0006508
Lele22g1623 535 Gene3D alpha/beta hydrolase 99 530 IPR029058 -
Lele22g1623 535 ProSitePatterns Serine carboxypeptidases, serine active site. 241 248 IPR018202 GO:0004185
Lele22g1623 535 ProSitePatterns Serine carboxypeptidases, histidine active site. 494 511 IPR033124 GO:0004185
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele22g1623 Lele-ChrLele22 21778669 21781907 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele22g1623 387 527 Calmodulin-binding Proteins AT2G22960 29.078 4.95e-17 77.4