Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele22g1610 ATGGATCCCGAAACATTCACCGCCAGCATCTTCAAGTGGGACCCACGCACCATCCTCTCAACTTCCGCGCTTAACCGCCCCCCGCTTCCCGAGTACACCATGGCTCCACCGGCGCCGCCATCGGCCGCCGCCTTTGTGAGGGGTTCCAGCAGGGAGGTGGGAGGGCTGGATGAGTTGTTCCAGGCTTATGGGATTCGGTACTACACGGCGGCTAAGATAGCTGAGCTTGGGTTCACGGTGAGCACTCTCGTCAACATGAAGGACGATGAGCTTGACGAGATGATGAACAGCCTCTCTCAGATTTTCCGTTGGGATCTCCTCGTCGGGGAACGATACGGTATCAAAGCCGCCGTGAGAGCCGAACGACGACGTATCGACGAAGAGGATTTGCGGCGTCGAAATCTTCTCTCAGCGGACACCACCACCACCAACGCACTCGACGCTCTCTCCCAAGAAGGATTGTCGGAGGAACCAGTGGTGCAACAAGAGAAAGAGGCGGGAGGCAGCACGTGGGAGGTGATTGCGGCGAAGGAGAGGAGGAAGCAGCAGCAGCGGAGGAGAAGGAAGACGGCGAGGATGAAGACGAGCCAGCACCACCACGACGATGAGAACGAGGATCCAGAAGACGACGGTGACGGAGAAGACATGAACGAAGAAGGAATGAACAACAATGGAGGATGCGAGAGACAGAGAGAGCACCCATTCATCGTGACGGAACCTGGGGAAGTGGCACGTGGCAAGAAGAACGGCCTAGATTATCTCTTCCACCTCTACGAACAATGCAGCGAGTTCTTAATCCAAGTCCAGAACATGGCCAAAGAACGCGGCGATAAATGCCCCACCAAGGTGACAAACCAGGTGTTTAGGTACGCGAAGAAGGCAGGAGCGAGCTACATAAACAAGCCCAAGATGCGACATTACGTGCACTGCTATGCGTTGCACTGTTTAGACGAGGAGGTGTCGAATGAACTGAGGATGAGGTATAAGGAGAGAGGCGAGAACGTGGGCGCATGGAGGCAAGCCTGTTATAAGCCCCTTGTGGCGATTGCGGCGCGTCAGGGTTGGGACATTGATGCTATCTTCAACGCGCATCCTCGTCTCTCCATTTGGTATGTACCCACTAAGCTCCGTCAACTTTGTCACGCCGAGAGGAACGCCGCCGTCGCTGCTGCCGGAGCTTCCAGTTCTGTCTCTGTCGGAAGCGCTCACCTCCCCTTCTGA 1221 0.561 MDPETFTASIFKWDPRTILSTSALNRPPLPEYTMAPPAPPSAAAFVRGSSREVGGLDELFQAYGIRYYTAAKIAELGFTVSTLVNMKDDELDEMMNSLSQIFRWDLLVGERYGIKAAVRAERRRIDEEDLRRRNLLSADTTTTNALDALSQEGLSEEPVVQQEKEAGGSTWEVIAAKERRKQQQRRRRKTARMKTSQHHHDDENEDPEDDGDGEDMNEEGMNNNGGCERQREHPFIVTEPGEVARGKKNGLDYLFHLYEQCSEFLIQVQNMAKERGDKCPTKVTNQVFRYAKKAGASYINKPKMRHYVHCYALHCLDEEVSNELRMRYKERGENVGAWRQACYKPLVAIAARQGWDIDAIFNAHPRLSIWYVPTKLRQLCHAERNAAVAAAGASSSVSVGSAHLPF 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele22g1610 406 Pfam DNA Binding Domain (C-terminal) Leafy/Floricaula 224 387 IPR035209 GO:0003677
Lele22g1610 406 PANTHER PROTEIN LEAFY 1 405 IPR002910 GO:0003677|GO:0006355
Lele22g1610 406 Coils Coil 174 194 - -
Lele22g1610 406 MobiDBLite consensus disorder prediction 180 194 - -
Lele22g1610 406 Gene3D Protein LEAFY 225 394 IPR038276 -
Lele22g1610 406 MobiDBLite consensus disorder prediction 149 229 - -
Lele22g1610 406 Pfam Floricaula / Leafy protein SAM domain 52 129 IPR035079 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele22g1610 Lele-ChrLele22 21617023 21618966 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele22g1610 1 396 Orphan Transcription Factor Family AT5G61850 61.647 7.99e-160 454
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LFY Lele22g1610 C_LFY_FLO 2.7e-106 CL0123