Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele22g1579 ATGGACAAGACTCGCGTTAGCTATGGAGTTCTCTTCGTCTTGCTTCTTCTTTTAGCTTCTGAAGGGATGGCGACGGAAACCCAGGGCATATGGAGACACCCATGCCGGGTAGCCAGCAGAAGGTTCCACGGCATGTGCATGAGCGACCGCAACTGCGCCAGCGTCTGCAAAACCGAAGGCCACGAGGATGGTGAGTGTGAAGGCCTCCGCCGCCGCTGCCTTTGCGCTAAGCGTTGCTGA 240 0.575 MDKTRVSYGVLFVLLLLLASEGMATETQGIWRHPCRVASRRFHGMCMSDRNCASVCKTEGHEDGECEGLRRRCLCAKRC 79
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele22g1579 79 PANTHER DEFENSIN-LIKE PROTEIN 1 8 76 - -
Lele22g1579 79 Pfam Gamma-thionin family 35 79 - -
Lele22g1579 79 CDD Knot1 46 75 IPR003614 GO:0006952
Lele22g1579 79 PRINTS Purothionin signature 64 78 IPR008176 GO:0006952
Lele22g1579 79 PRINTS Purothionin signature 34 49 IPR008176 GO:0006952
Lele22g1579 79 SUPERFAMILY Scorpion toxin-like 34 79 IPR036574 -
Lele22g1579 79 SMART gth_4 34 79 IPR003614 GO:0006952
Lele22g1579 79 Gene3D - 34 79 IPR036574 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele22g1579 Lele-ChrLele22 21424044 21424377 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele22g1579 3 79 Plant Defensins Gene Families AT1G61070 37.662 1.91e-15 62.8