Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele22g1573 ATGACAGCAATAAAGTTCTTCATTTGCTTGGCTCCTTCCAGCTTTCATGGCGGATTCAAGCTAGCAACTGTCTCACCCTTTCCCTTTCTACTCTGCTTTCCCAGAAGTAACAAGAAGTCTCCAGCTGAAATTTTCTTGGACATCAAAGAGCCTAACAACATGCTTCGCCCAAAATTAATCACAAGGTTACTGTTATTCCTCAGTGTATTGAGACTCAGTTCTGCAATCACAAATCCTGATGTAGAAGGTGAAGCTTTGGTTGAAGTTAGGAAGGCTCTTCATGATCCCAACCATCGAATGGCGGATTGGAATTATTTTTTTGTGTCTGCATGCGTTAGTTGGTCACATGTCACTTGTAGAAATGGACACGTTATAGCTCTGAGCCTGGCTTCATATGGACTTTCTGGAACAATATCTCCTTCAATAACCAGATTGAAGTATTTGTCCAGCTTGATCTTGGGAGGGAATGATTTATCCGGACCCGTACCAGACACTCTTGCCTATATTAGTGGGTTGGCAGAATTGGACCTTTCATCTAATGGTCTAACTGGAGACATCCCAATGCAACTCTTTTCAGTTCCAAGCTTCAACTTTTCAAATACTCAACTTCATTGTGGATCTCACTTGAAGCGGCTTTGCGTTTCTAATTCTGCTACCCAAGCTTCTACCAACAAATCAAAAGTTGCAGTGGTTGTGAGTTTCGCTAGTTGTGGTGCATTAGCACTTCTTTGTCTTGGGGCTATCTTTGCATATAGATACCGATACATACAAAGACACAAAAATGAAGTCTTCTTTGATGTTTCAGGTGAAGATGAGAGCAAAATTTCCTTGGGACAACTGAGAAGATTTTCCTTGAGAGAGCTACAACTTGCCTCTAAAAATTTCAGTGAAAGCAATGTGATAGGCCAGGGAGGCTTTGGAAAAGTTTACAAAGGAGTACTTTCAGATTACACCAAAGTTGCAATCAAACGTCTAGTTGATTATAATAATCCTGGTGGTGAGGCTGCATTCCAAAGAGAAGTTCAACTAATAAGTGTTGCAGTTCACATGAATCTCCTTCGCTTAATTGGATTCTGTACAACCTCTACTGAGAGAATCCTTGTTTACCCTTTCATGGAAAATCTAAGCGTCGCATATCGCTTGAGAGCTAAACTTGTTGATCCAAGATTGACCCATGTCACTACTCAGGTGAGAGGCACAATGGGTCATATTGCCCCAGAATATCTGTCCACAGGAAAATCATCTGAGAAAACCGATGTCTTTGGATACGGCATAACTCTTCTTGAACTCGTCACCGGTCAGCGCGCCATAGACTTGTCCCGGCTCGAAGAGGAGGAGGATGTTCTTCTGCTTGATCATATAAAGAAACTGCTGAGAGAGAAGAGGCTAGAGAACATAGTGGATAGGAATCTGGAGAGTTATGATCCAGAAGAAGTGGAGACAATAGTTCAAGTGGCATTGCTTTGCACACAAGGGATGCCAGAGGACAGGCCAAGCATGTCAGAGGTAGGGAATATGCTTCAGGGAGTGGGTTTAGCAGAGAGATGGGCAGAGTGGGAGCAATTGGAAGAGATCAATAATCAGGAATGCTCATCCCTTTCTCATCACTTTGCTTGGGCTGATGAATCCACTCTTCAAGAGGCCATACAACTTTCCACTGCAAGATGA 1668 0.4275 MTAIKFFICLAPSSFHGGFKLATVSPFPFLLCFPRSNKKSPAEIFLDIKEPNNMLRPKLITRLLLFLSVLRLSSAITNPDVEGEALVEVRKALHDPNHRMADWNYFFVSACVSWSHVTCRNGHVIALSLASYGLSGTISPSITRLKYLSSLILGGNDLSGPVPDTLAYISGLAELDLSSNGLTGDIPMQLFSVPSFNFSNTQLHCGSHLKRLCVSNSATQASTNKSKVAVVVSFASCGALALLCLGAIFAYRYRYIQRHKNEVFFDVSGEDESKISLGQLRRFSLRELQLASKNFSESNVIGQGGFGKVYKGVLSDYTKVAIKRLVDYNNPGGEAAFQREVQLISVAVHMNLLRLIGFCTTSTERILVYPFMENLSVAYRLRAKLVDPRLTHVTTQVRGTMGHIAPEYLSTGKSSEKTDVFGYGITLLELVTGQRAIDLSRLEEEEDVLLLDHIKKLLREKRLENIVDRNLESYDPEEVETIVQVALLCTQGMPEDRPSMSEVGNMLQGVGLAERWAEWEQLEEINNQECSSLSHHFAWADESTLQEAIQLSTAR 555
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele22g1573 555 FunFam Somatic embryogenesis receptor kinase 1 264 371 - -
Lele22g1573 555 Gene3D Transferase(Phosphotransferase) domain 1 374 527 - -
Lele22g1573 555 SMART serkin_6 295 507 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele22g1573 555 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 63 518 - -
Lele22g1573 555 SUPERFAMILY L domain-like 83 297 - -
Lele22g1573 555 ProSitePatterns Protein kinases ATP-binding region signature. 301 323 IPR017441 GO:0005524
Lele22g1573 555 FunFam Leucine-rich repeat receptor-like kinase 81 205 - -
Lele22g1573 555 ProSiteProfiles Protein kinase domain profile. 295 555 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele22g1573 555 Gene3D Phosphorylase Kinase; domain 1 264 371 - -
Lele22g1573 555 Pfam Leucine rich repeat N-terminal domain 81 119 IPR013210 -
Lele22g1573 555 Gene3D Ribonuclease Inhibitor 81 205 IPR032675 -
Lele22g1573 555 Pfam Protein tyrosine and serine/threonine kinase 298 396 IPR001245 GO:0004672|GO:0006468
Lele22g1573 555 SUPERFAMILY Protein kinase-like (PK-like) 280 535 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele22g1573 Lele-ChrLele22 21389211 21393336 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele22g1573 59 555 Receptor kinase-like Gene Family AT1G71830 39.583 3.41e-123 374
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Lele22g1573 PK_Tyr_Ser-Thr 7.4e-12 CL0016