Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele22g1562 ATGCCTCTTTTAAAAAGGAAGCCTTTTGTCTTGGCTGAGCCACCTAAGGATTTGGAGCCACATGAGCTTGTCCATCAAGTTCGATTTACAAAAGAAATTTTCCGAGATTATCATTCAAAATTTTCTGGGTATATGATGTCTACCGGTCTGCTGAATTTTATAGGAACTGGATGTGGTTTATGGTGGTATATATCTGAATGCATGCTTCCTTTGAGGGACCTCGCCGACGCAATAGCTGAAAAATTGCAGGAACAGCTTTATGTGGGTGTGGAGCTGCATGGGAAAAAGGATGACGAGGAGCATCCTTGCAAAATATTGAATCTCGTGCAGGAAGGAGTTGATGAATCCCGTTATGAGGTAGCTTGGCTTGACAAGAACAAGAGAACAATCGGAAAAGCAGAAGTGAGTGCCAAGGATTTGGTGCAGAAGAAATTTCCTTTTAGCAGGAACATCTTGAAATCTTTTATCCGGGAATCTACATATCGTAATGCTCCATGGGTGATACATGATGAATTGGCTCAAAATTATGGAATCGCAACTGATATCCCAGAGGAATTAAAAGGAAGAGCTTTCTTCAACAACGGACTTTTAATTTGCAACAAGAAAAGGAAAAATGAGGATGTAAATGGAGAAGCTGAAAATTGCAAAAGGAGTAAGTCGGATCATTCAGTGAAAGAAAATGGCCAATGTAAGGAAGAACCTATCAAATATCCGATTGAAGATTTATTGGTGAAGCCTAGACCAAATGATCCTGCTTGTCCTTCTCCATCGAGAGACTTCATTGTTCCAATTCATTGTGTAGGGGATCTCTTAATGGTTTGGGATTTTTGTACTTCTTTTGGTAGGCTGTTGCACTTGTCACCCTACTCTCTGGAAGATTTTGAAAACTCAATCTGCCACAAGGAAAGCAACGTGGTTCTCCTTGTAGAATCTCATGCAGCACTCTTGCGGGTGCTCATGAAAGACGATGGTGAGTATGCTTCAGCTGTACAGAAAAGAAAACGGAAGTTTAAGGTCAGCATCTCCCTTATTACAATGATTAATTGGCAAGAATATTTATGCGATTTTCTAGAAATGATCAATGTTCCTGGATTACGGCAGTTTGAAGCTACCATAAAAAGGGGACATTATGGCCTCGTTGATATCATTTCTAAGCTAGAAATCCTGTACGAATTGGTCAATCGAGTTCTTGAAACCTCCATTTTTAGGGAAAAGTTGGACGAAGTTATTGAACAGCGGCAGGCACTTGGTGCTACTAGAAGAGGAGAAGCGCTAGAAGATGGTAGAAAAAGAAGAGAAGAAAAGGAACGGTTGAAGGGTGAGTTTGAGAGCAATGGAAGTATGGATGGGCACTGTCAAATAAGTGTGGCAACTGTCTCAACAAAAAATAATAACAGTAAACAGAACGGAGAAATAGGAAAGAAAAGAAATGGAGAGAAGGAATCTTCTAGGAACGGGGATGCTTTGGGTGGAAGTATGGATAAGCATTCAAACGGTGCATCCAAAAAGTCATCTAAGAAGCTGAGTTTAGAACTGAAAGAACCAGAAGAAAATGAAAATGACTCATCCAGAAAGGAATCACAGAAGCAATTAAACGGGGAGAAGAATCCATCAGAGAAGAATAGTTTTGAACAGAGGAGAGAATATTTTGAACGAGAGATTGAAAAACGATTTGTTCGTACAAGTCCCCTAGGTAAAGACAGGCATTACAACAGGTATTGGTGGTTTCGCCGTGATGGGAGGCTATTTGTAGAAAGTTCTGATTCCAAGGAGTGGGGCTACTACAGCAGCAAGGAAGAGATATGGAGAATAGTAGCAAATGATTCAGTTGGTCCAAGGTCTGAGAAGGAACAGGAGGATTAA 1863 0.4058 MPLLKRKPFVLAEPPKDLEPHELVHQVRFTKEIFRDYHSKFSGYMMSTGLLNFIGTGCGLWWYISECMLPLRDLADAIAEKLQEQLYVGVELHGKKDDEEHPCKILNLVQEGVDESRYEVAWLDKNKRTIGKAEVSAKDLVQKKFPFSRNILKSFIRESTYRNAPWVIHDELAQNYGIATDIPEELKGRAFFNNGLLICNKKRKNEDVNGEAENCKRSKSDHSVKENGQCKEEPIKYPIEDLLVKPRPNDPACPSPSRDFIVPIHCVGDLLMVWDFCTSFGRLLHLSPYSLEDFENSICHKESNVVLLVESHAALLRVLMKDDGEYASAVQKRKRKFKVSISLITMINWQEYLCDFLEMINVPGLRQFEATIKRGHYGLVDIISKLEILYELVNRVLETSIFREKLDEVIEQRQALGATRRGEALEDGRKRREEKERLKGEFESNGSMDGHCQISVATVSTKNNNSKQNGEIGKKRNGEKESSRNGDALGGSMDKHSNGASKKSSKKLSLELKEPEENENDSSRKESQKQLNGEKNPSEKNSFEQRREYFEREIEKRFVRTSPLGKDRHYNRYWWFRRDGRLFVESSDSKEWGYYSSKEEIWRIVANDSVGPRSEKEQED 620
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele22g1562 620 MobiDBLite consensus disorder prediction 418 545 - -
Lele22g1562 620 MobiDBLite consensus disorder prediction 209 228 - -
Lele22g1562 620 PANTHER BROMODOMAIN ADJACENT TO ZINC FINGER DOMAIN, 2A 68 601 - -
Lele22g1562 620 MobiDBLite consensus disorder prediction 420 444 - -
Lele22g1562 620 MobiDBLite consensus disorder prediction 506 545 - -
Lele22g1562 620 ProSiteProfiles DDT domain profile. 264 325 IPR018501 -
Lele22g1562 620 MobiDBLite consensus disorder prediction 448 471 - -
Lele22g1562 620 Pfam Williams-Beuren syndrome DDT (WSD), D-TOX E motif 559 600 IPR028941 -
Lele22g1562 620 SMART testlast3 264 325 IPR018501 -
Lele22g1562 620 Pfam DDT domain 265 322 IPR018501 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele22g1562 Lele-ChrLele22 21271378 21276115 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele22g1562 266 322 Homeobox Transcription Factor Family AT1G28420 42.105 7.12e-06 47.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR DDT Lele22g1562 WSD 1.6e-11 No_clan