Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele22g1561 ATGGCGACTTCTCTACTTCGGAGAACCAGTATCATCCACAATGCCCGCCGCTTCAATTTCCCTACTTCTTGGTGTCTCAGTGAAGTGTTGACTCAGCATTTTCCGATCGATAAGGCTGTGAGTGAAAATGCTATTCACAGCGTTTCAAAGGGCGTTTCGTTTTACTCACAGGTCGCCGGTGGTGGTGGACTCCCATCGTTTATGCGTGGAGCTGTATTCTGGGAATCAGGAAAGCCTCTCTCTGTTGAGGAATTCCACATCCCTCGCCCCAAGGCTGGAGAAATTCTCGTTAGAACCAAGGCTTGTGGAGTATGCCACTCCGATCTCCACGTTATAAAAGATGAAATTCCTTTTTCCAGTCCTTGCGTGCTGGGACATGAGATTACTGGTGAAGTTGTTGAACATGGACCGCTCACAGATGATAAAACACAACAAAGACTTCCAGTTGGATCTCGAGTCGTTGGGTCCTTCATTATGCCATGCGGCAACTGTTCTTACTGTTCAAAGGGGCATGATGATTTATGTGAAGCTTTCTTTTCTTATAACCGGGCAAAAGGAACCCTCTATGATGGTGAAACTCGGCTGTTTCTTCGCAGCAGTGGAAAACCAGTCTACATGTATAGTATGGGAGGGCTTGCCGAATACTGTGTTGTGCCAGCAAATGCGTTGACAGTATTACCAGACTCATTGCCATATACAGAGTCTGCAATACTAGGATGTGCTGTCTTTACAGCATATGGTGCTATGGCCCATGCAGCTGAGGTGCGTCCAGGGGATTCTGTTGCTGTTATTGGAACGGGGGGTGTTGGTTCTAGCTGTTTGCAGATTGCTAGAGCATTTGGTGCTTCTGAAATTATTGCTGTGGATATTCAGGATGATAAGCTAGAGAAAGCAAAAACTTTTGGTGCTACTCACACTGTCAATGCAGCACGAGAAGATCCAATTGGAAAGATAATTGAAATAACTGGTGGAAAAGGTGTTGACGTTGCTGTGGAAGCCTTGGGAAGACCACAGACATTTTCCCAGTGCACACAAAGTGTGAAGGATGGAGGAAAAGCTGTGATGATTGGACTAGCAAAAGCTGGTGCTGTAGGAGAAATGGATATAAATCGCCTTGTTCGAAGAAAGATAAAAGTTATTGGATCGTATGGAGGTAGAGCAAGGCAAGATCTTCCTAAGTTAGTCAGACTGGCAGAAACAGGTATCTTCAATCTTTCCAATACTGTTTCTAGAAGATACAACTTTGAAGAGGCAGGCAAAGCATTTGAAGATCTCAACCAGGGAAAAATTGTTGGACGAGCTGTCATTGAGATAAGATAA 1320 0.4485 MATSLLRRTSIIHNARRFNFPTSWCLSEVLTQHFPIDKAVSENAIHSVSKGVSFYSQVAGGGGLPSFMRGAVFWESGKPLSVEEFHIPRPKAGEILVRTKACGVCHSDLHVIKDEIPFSSPCVLGHEITGEVVEHGPLTDDKTQQRLPVGSRVVGSFIMPCGNCSYCSKGHDDLCEAFFSYNRAKGTLYDGETRLFLRSSGKPVYMYSMGGLAEYCVVPANALTVLPDSLPYTESAILGCAVFTAYGAMAHAAEVRPGDSVAVIGTGGVGSSCLQIARAFGASEIIAVDIQDDKLEKAKTFGATHTVNAAREDPIGKIIEITGGKGVDVAVEALGRPQTFSQCTQSVKDGGKAVMIGLAKAGAVGEMDINRLVRRKIKVIGSYGGRARQDLPKLVRLAETGIFNLSNTVSRRYNFEEAGKAFEDLNQGKIVGRAVIEIR 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele22g1561 439 FunFam Sorbitol dehydrogenase 245 383 - -
Lele22g1561 439 PANTHER NAD-DEPENDENT ALCOHOL DEHYDROGENASE 67 436 - -
Lele22g1561 439 Pfam Zinc-binding dehydrogenase 268 398 IPR013149 -
Lele22g1561 439 FunFam Alcohol dehydrogenase (Zinc) 72 257 - -
Lele22g1561 439 Pfam Alcohol dehydrogenase GroES-like domain 93 223 IPR013154 -
Lele22g1561 439 SMART PKS_ER_names_mod 77 436 IPR020843 GO:0016491
Lele22g1561 439 SUPERFAMILY GroES-like 64 271 IPR011032 -
Lele22g1561 439 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 230 403 IPR036291 -
Lele22g1561 439 CDD Zn_ADH10 68 437 - -
Lele22g1561 439 Gene3D - 245 382 - -
Lele22g1561 439 Gene3D - 72 428 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele22g1561 Lele-ChrLele22 21265883 21269958 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele22g1561 85 438 Monolignol Biosynthesis Gene Families AT4G37990 27.222 1.24e-19 88.2