Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele22g1555 ATGGACAAGTACGAGACCGTCAAGGACTTGGGGGCTGGCAACTTTGGGGTCGCCAGGCTCATGAGGAACAAGGAGACCAAGGAACTCGTCGCCATGAAATACATCGAGCGTGGCCACAAGGTGGTTTTGACTCCCACTCATTTGGCTATAGTAATGGAGTATGCAGCTGGAGGGGAGCTATTTGAGAGGATCTGTACTGCTGGCAGATTCAGTGAAGATGAGGCTAGATATTTCTTTCAGCAGTTGATCTCAGGTGTCAATTTCTGTCATGCCATGCAAATATGCCACAGAGATTTGAAGCTGGAAAATACTCTTCTAGATGGAAGCCCTGCGCCTCGCTTGAAGATTTGCGACTTCGGTTATTCCAAGTCATCTTTGCTGCATTCGCGACCCAAATCAACTGTTGGAACTCCCGCTTACATAGCCCCTGAAGTCCTTTCTAGGCGCGAGTATGATGGCAAGTTGGCTGATGTATGGTCATGTGGGGTAACTCTCTATGTCATGCTGGTTGGAGCATATCCCTTTGAGGACCATGCAGATCCCAGGAATTTTAGGAAAACAATTCAGCGCATAATGGCTGTCCAATACAAAATCCCTGATTACGTCCACATATCTCAAGATTGCAGACACCTCCTTTCTCGTATATTTGTCGCAAATCCGTTGAAGAGAATAACTCTCAAGGAAATCAAGAGCCGCCCATGGTTTTTAAAGAACCTTCCAAGGGAGTTAACTGAATCAGCTCAAGCTACCTATTATCAGAGAGACAACCCAAGCTTTTCCGTTCAAAGTGTGGAGGAGATAATGAAAATTGTGGGAGAAGCTAGAAACCCACCTCCTGTATCTAGACCTATCAAAGGTTTTGGCTGGGAAGGTGAAGAAGATGAGGAAGCTGGGTTGCAGGAGGAGGAGGGTGAAGAAGATGAATATGACAAAAGGGTCAAGGAGGCTCATGCCAGTGGAGAATTTCAAGTCAGTTAA 978 0.4632 MDKYETVKDLGAGNFGVARLMRNKETKELVAMKYIERGHKVVLTPTHLAIVMEYAAGGELFERICTAGRFSEDEARYFFQQLISGVNFCHAMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDHADPRNFRKTIQRIMAVQYKIPDYVHISQDCRHLLSRIFVANPLKRITLKEIKSRPWFLKNLPRELTESAQATYYQRDNPSFSVQSVEEIMKIVGEARNPPPVSRPIKGFGWEGEEDEEAGLQEEEGEEDEYDKRVKEAHASGEFQVS 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele22g1555 325 SMART serkin_6 4 235 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele22g1555 325 FunFam Serine/threonine-protein kinase SRK2A 55 243 - -
Lele22g1555 325 Pfam Protein kinase domain 41 235 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele22g1555 325 ProSitePatterns Serine/Threonine protein kinases active-site signature. 94 106 IPR008271 GO:0004672|GO:0006468
Lele22g1555 325 Gene3D Transferase(Phosphotransferase) domain 1 1 276 - -
Lele22g1555 325 ProSitePatterns Protein kinases ATP-binding region signature. 10 33 IPR017441 GO:0005524
Lele22g1555 325 PANTHER SERINE/THREONINE KINASE 3 269 - -
Lele22g1555 325 MobiDBLite consensus disorder prediction 279 325 - -
Lele22g1555 325 ProSiteProfiles Protein kinase domain profile. 1 235 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele22g1555 325 Coils Coil 299 319 - -
Lele22g1555 325 SUPERFAMILY Protein kinase-like (PK-like) 2 272 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele22g1555 Lele-ChrLele22 21223815 21226605 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele22g1555 3 238 CBL-interacting serine-threonine protein kinases AT4G24400 38.889 1.44e-55 184
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Lele22g1555 Pkinase 2.6e-51 CL0016