Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele22g1548 ATGGAGGTTAAACTAGCGCCAGTCCAACCATACACAAAGATGAGTAAAGAAAATGATAATGAGTTCGCAGCCAATCAACTGCCTCCTTCCCTGCGCAATCGTCGTCATTCCCAAAAAAAATCAGTTAAAGGCACGTCTGAGAGTATTAAGGGTTCAGATACGTCAAACATCGATGTTAAAGAGGATAGTCATAAGAGTTCAGATGATGAGCCAGTGGCTGCAGCTCCTAAGCAGTTGCCTTTCGAATTTAGAAAACTTGAAGCTTGTCTTGAATCTGCATGCAGATGCCTTGAATCTGAGACTCAAACATTGGAAGAAGAGGCTTACCCAGCTCTAGATGAATTGACTTCTCAAATTAGCACACTCAATCTGGAACGCGTGAGACAGATCCAGAGTCGTCTGGTTACACTTTCTGGTCGTGTGCAAAAGATGAGTGAGTACGTGGACGACACAGAGGACTACATCAACATAATGTTGGATGATAAGCAGATTCGGCTGCTGCATGTATCAGTAAAACTCAATACAGCGAACTTGATACTAGGTGCCGGCATCGCGGTGATCAAGAAGAAGACGAATTCCCCCCACTTGTCACTTCTACTTCTTCCATTCTGCAATGCGTCTTGGTGGGACTCTGGTTGTTTTAGCTTCCCACATGAGCTCATGATCATTTGCAGAGCTTCAAGCACCAATCTTGGAGCTCAAGGGCCTCCATGGTTACCATCGAAAGCAAACCCACGATTTTTTAGGAGCTCTTTCCCAGGCAAATCTTCTCAGCTTAAGAAGGGTTTTGTGTTTTCCTCGATTAAAAGGGTTCAGTGGAAACCCAGAAGCGACTTCTCTGTCAACAACAATTACTGTAACAGAAGCCACGGGAAGGAAGGCAATGTTAAGCAAGAAGAGGATGGTGAGCGTGAGGTGCATTGTGAGGTCGAAGTGACATCATGGAGAGAACGGAGTGTTAAAGCAAAAATTTCAATCGATGCAGATATCGAATCAGTTTGGAATGCTCTTACAGATTATGAGCATCTAGCCGATTTCATCCCAAACCTTGTCGGGAGTGGGCGAATTCCTTGCCCTTATCCAGGAAGGATATGGTTAGAGCAAAGGGGCTTCCAAAGGGCAATGTATTGGCATATAGAAGCTCGCGTTGTATTGGATCTTCGAGAATCCATCAATTCAGCATGTGATCGAGAACTTCACTTTTCCATGGTTGATGGAGACTTTAAGAAGTTTGATGGCAAATGGTCCTTAAAATCTGGAACAAGGTCATCAACAACTATTTTGTGCTATGAAGTTAACGTGATACCAAGATTCAATTTCCCGGCTATTTTCTTGGAAAGGATTATCAGGTCAGATCTTCCTGTCAACCTTCGAGCCTTGGCTTATAGAGTTGAAAAGAACTTGTTGGGAAATCAGAGGCCTCCAGTGCCAGAAGATTACTTGAATAAAGATTCTGTGGCTATAAATGGGTCAACTGGCAAAAAGATAAATGATACTTTTCATGAAAGCGATCAATTGTCTTCTGGAGAGAGCAAAGCAGGTCTTGCTGGCTCAATTTCTGGCTCCTTGCCTGTAGCTTCCGGTGAAGTCAACAACAACTGGGGTGTGTTTGGAAAGGTTTGCAGACTTGACAAGCCTTGTGTGGTGGATGAAGTTCACCTCCGCAGATTTGATGGACTTTTGGAAAATGGAGGTGTTCATCGCTGTGTTGTTGCAAGTATCACTGTTAAAGCTCCTGTCCGTGAAGTATGGAATATTCTGACTGCCTATGAGAGTCTTCCTGAGATCGTTCCAAATTTAGCAATCAGCAGAATTTTATTCCGAGACAACAATAAAGTTCGTATTCTTCAGGAGGGGTGCAAGGGTCTGCTTTATATGGTACTTCATGCTCGCGTGGTGCTAGACTTGTGTGAACATCTTGAGCAGGAGATCAGTTTTGAACAGGTTGAAGGGGACTTTGACTCATTCCAGGGAAAATGGATTTTTGAGCAACTAGGGAATCATCACACTTTGCTGAAGTACTCTGTGGAGTCAAAAATGCGCAAAGACACATTCCTTTCTGAAGCAATCATGGAGGAGGTTATTTATGAAGATCTCCCATCAAACTTATGTGCAATAAGAGATTACATAGAGAACAGAGAGGCATCCAATTCATCAGAAGAGAGTGAGCAGGAAAGCGATTCAACTTATCAAGTTCTTTCATCTGACTTTGAAGGAGATGATGAATATAGTTCAGCTGAAGAGATTTCTAATGATGATGTCGAAAGTTCATCATATCAACAAAGGCCTAGGGTTCCAGGCTTACATAGGGACATTGAAGTTCTAAAATCTGAAATCTTGAAATTTATTTCAGAATATGGGCAGGAGGGATTTATGCCAATGAGGAAGCAACTGCGTCTGCACGGACGGGTGGATATCGAGAAGGCTATAACTCGCATGGGCGGTTTCCGGAAAATAGCGACGACAATGAACCTATCTCTAGCTTACAAATACCGCAAACCAAAGGGTTACTGGGACAATTTTGAAAATTTGCAGGAGGAGATTAGTCGATTTCAAAGGAACTGGGGAATGGATCCTTCATTTATGCCCAGTAGAAAGACATTTGAACGTGCAGGGCGCTATGATATTGCTCGTGCACTAGAAAAGTGGGGTGGTCTGCATGAAGTTTCTCGCCTTCTTTCGCTTAAGGTGAGACATCGAGGCAGACAACATGGTATACTTGCCAAGGACAAGAGAACTGATCATGTAGAATCATCAGCTCATGTATATAATGAGAACAAGACTCCATCTAAACCATGTATTGCTCAAGATACACATAAGTGGCTTTCAAAGCTAAAACATATGGACATAAACTGGGTAGAGTAA 2865 0.429 MEVKLAPVQPYTKMSKENDNEFAANQLPPSLRNRRHSQKKSVKGTSESIKGSDTSNIDVKEDSHKSSDDEPVAAAPKQLPFEFRKLEACLESACRCLESETQTLEEEAYPALDELTSQISTLNLERVRQIQSRLVTLSGRVQKMSEYVDDTEDYINIMLDDKQIRLLHVSVKLNTANLILGAGIAVIKKKTNSPHLSLLLLPFCNASWWDSGCFSFPHELMIICRASSTNLGAQGPPWLPSKANPRFFRSSFPGKSSQLKKGFVFSSIKRVQWKPRSDFSVNNNYCNRSHGKEGNVKQEEDGEREVHCEVEVTSWRERSVKAKISIDADIESVWNALTDYEHLADFIPNLVGSGRIPCPYPGRIWLEQRGFQRAMYWHIEARVVLDLRESINSACDRELHFSMVDGDFKKFDGKWSLKSGTRSSTTILCYEVNVIPRFNFPAIFLERIIRSDLPVNLRALAYRVEKNLLGNQRPPVPEDYLNKDSVAINGSTGKKINDTFHESDQLSSGESKAGLAGSISGSLPVASGEVNNNWGVFGKVCRLDKPCVVDEVHLRRFDGLLENGGVHRCVVASITVKAPVREVWNILTAYESLPEIVPNLAISRILFRDNNKVRILQEGCKGLLYMVLHARVVLDLCEHLEQEISFEQVEGDFDSFQGKWIFEQLGNHHTLLKYSVESKMRKDTFLSEAIMEEVIYEDLPSNLCAIRDYIENREASNSSEESEQESDSTYQVLSSDFEGDDEYSSAEEISNDDVESSSYQQRPRVPGLHRDIEVLKSEILKFISEYGQEGFMPMRKQLRLHGRVDIEKAITRMGGFRKIATTMNLSLAYKYRKPKGYWDNFENLQEEISRFQRNWGMDPSFMPSRKTFERAGRYDIARALEKWGGLHEVSRLLSLKVRHRGRQHGILAKDKRTDHVESSAHVYNENKTPSKPCIAQDTHKWLSKLKHMDINWVE 954
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele22g1548 954 Gene3D - 561 720 IPR023393 -
Lele22g1548 954 SUPERFAMILY Bet v1-like 320 466 - -
Lele22g1548 954 PANTHER POLYKETIDE CYCLASE / DEHYDRASE AND LIPID TRANSPORT PROTEIN 304 851 - -
Lele22g1548 954 Gene3D - 319 468 IPR023393 -
Lele22g1548 954 Coils Coil 87 107 - -
Lele22g1548 954 CDD SRPBCC_11 570 711 - -
Lele22g1548 954 MobiDBLite consensus disorder prediction 13 32 - -
Lele22g1548 954 MobiDBLite consensus disorder prediction 54 71 - -
Lele22g1548 954 MobiDBLite consensus disorder prediction 492 512 - -
Lele22g1548 954 CDD SRPBCC_11 320 466 - -
Lele22g1548 954 MobiDBLite consensus disorder prediction 1 74 - -
Lele22g1548 954 MobiDBLite consensus disorder prediction 741 764 - -
Lele22g1548 954 SUPERFAMILY Bet v1-like 571 715 - -
Lele22g1548 954 Pfam Polyketide cyclase / dehydrase and lipid transport 576 707 IPR005031 -
Lele22g1548 954 Pfam Polyketide cyclase / dehydrase and lipid transport 326 460 IPR005031 -
Lele22g1548 954 Gene3D Magnesium transport protein CorA, transmembrane region 56 146 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele22g1548 Lele-ChrLele22 21142387 21155162 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele22g1548 115 186 MRS2 Gene Family AT3G19640 48.000 3.35e-11 65.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele22g1548 22 21142387 21155162 Lele22g1548 22 21142387 21155162 ECH
Lele22g1548 22 21142387 21155162 Lele23g0449 23 3233960 3238268 hybridization
Lele22g1548 22 21142387 21155162 Lele24g1511 24 20920167 20929105 hybridization