Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele22g1540 ATGTTTCAAGACGCAGTGGAATTACAGCGAGAAGCAGAAGAAAGAGAGAAGAACAGAGGAAGAAGAAGAATGAACGGTGAATTGGAATTGCCACCTGGGTTCAGATTCCACCCAACGGACGAGGAGCTGGTGAATCACTATCTCTGTAGAAAATGTGTCGCTCAGTCCATTTCTGTTCCCATTATCAAAGAGATCGATCTCTACAAATTTGATCCATGGCAGCTTCCTGAAATGGCGTTGTACGGCGAGAAGGAATGGTACTTCTTTTCTCCGAGGGACCGAAAATACCCGAACGGTTCGAGGCCGAACCGGGCGGCTGGAAGTGGGTATTGGAAAGCAACCGGAGCCGACAAGCCGATTGGTAAACCGAAGCCACTGGGAATTAAGAAGGCTCTCGTATTCTACGCCGGCAAGGCCCCCAATGGCATCAAAACGAATTGGATCATGCATGAATATCGCCTCGCTAACGTCGACAGATCCGCCGGCAAGAAAAAGAACCTAAGGCTTGATGATTGGGTGTTATGTCGAATTTACAACAAGAAAGGCACGGTTGAGAAATACAATGTGGTGGATCAGAAAGCCGGCAAGTTATCGGAATTCCATGACCACGAGACCAAACCGGAAATCAAATCGTACGACCACAATAATAAGGTGCAGGCACCGGCGAAGTTCATAAATGACCAATTCTATATGGACACGTCAGACTCGGTGCCGAGGCTGCACACGGACTCGAGCTGCTCCGACCACGTGGTTTCGCCGGATGTCACGTGCGACAAGGAGGTACAGAGCGAGCCCAAGTGGAACGAGCTAGGGCTCGGAGGAGAAGTAGATGGGTTCGATTTTGAATTGAATTACCTCTCGGGACAAGATCCTTTTGGCTCTTCTGTACAGTACCAAATGAACCAGCTCTCGCCATTGCAGGACATGTTCATGTTTCCGCAGAAGCCATTTTGA 954 0.4916 MFQDAVELQREAEEREKNRGRRRMNGELELPPGFRFHPTDEELVNHYLCRKCVAQSISVPIIKEIDLYKFDPWQLPEMALYGEKEWYFFSPRDRKYPNGSRPNRAAGSGYWKATGADKPIGKPKPLGIKKALVFYAGKAPNGIKTNWIMHEYRLANVDRSAGKKKNLRLDDWVLCRIYNKKGTVEKYNVVDQKAGKLSEFHDHETKPEIKSYDHNNKVQAPAKFINDQFYMDTSDSVPRLHTDSSCSDHVVSPDVTCDKEVQSEPKWNELGLGGEVDGFDFELNYLSGQDPFGSSVQYQMNQLSPLQDMFMFPQKPF 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele22g1540 317 ProSiteProfiles NAC domain profile. 30 180 IPR003441 GO:0003677|GO:0006355
Lele22g1540 317 SUPERFAMILY NAC domain 25 180 IPR036093 GO:0003677|GO:0006355
Lele22g1540 317 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 29 232 - -
Lele22g1540 317 FunFam NAC transcription factor 39 184 - -
Lele22g1540 317 Pfam No apical meristem (NAM) protein 31 154 IPR003441 GO:0003677|GO:0006355
Lele22g1540 317 MobiDBLite consensus disorder prediction 7 26 - -
Lele22g1540 317 MobiDBLite consensus disorder prediction 1 26 - -
Lele22g1540 317 Gene3D NAC domain 39 184 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele22g1540 Lele-ChrLele22 21072018 21073247 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele22g1540 24 317 NAC Transcription Factor Family AT1G01720 63.576 3.34e-125 358
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lele22g1540 NAM 2.9e-38 No_clan