Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele22g1526 ATGTCGGAAAGAGGAAAGAGGAAGGACGAGCAGGATCAAGCTTCCGACGGCGATTCTGAGGGTCACGCGCCACCCAAGAAGTTCCAGAAGAAGGATTCCAGTGACTCTGATGACATCGTCGTCTGTGAGATATCTAAGAACAGACGGGTGACTGTGAGGAACTGGAATGGCAGGATTTGGGTGGATATTCGGGAATTTTACCTCAAAGATGGGAAGCAATTGCCTGGAAAGAAAGGTATCTCACTGAGCATTGACCAGTGGAAGGTGCTTCGGGATCATGTTGATAAGATTGATAATGCTCTTACAGAGGATTCCTAG 318 0.478 MSERGKRKDEQDQASDGDSEGHAPPKKFQKKDSSDSDDIVVCEISKNRRVTVRNWNGRIWVDIREFYLKDGKQLPGKKGISLSIDQWKVLRDHVDKIDNALTEDS 105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele22g1526 105 MobiDBLite consensus disorder prediction 1 37 - -
Lele22g1526 105 PANTHER RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATOR 13 103 IPR045125 GO:0003713|GO:0060261
Lele22g1526 105 SUPERFAMILY ssDNA-binding transcriptional regulator domain 41 102 IPR009044 GO:0003677|GO:0006355
Lele22g1526 105 Pfam Transcriptional Coactivator p15 (PC4) 42 93 IPR003173 GO:0003677|GO:0006355
Lele22g1526 105 FunFam Putative transcriptional co-activator 32 105 - -
Lele22g1526 105 Gene3D Transcriptional Coactivator Pc4; Chain A 30 105 IPR009044 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele22g1526 Lele-ChrLele22 20938965 20940577 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Coactivator p15 Lele22g1526 PC4 1.2e-25 CL0609