Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele22g1505 ATGCGTTTGAGCCAAGTTTCATTGCCTTTGAGGGTTTTAGAAGGGTTCAAGCTGCGATTTAAACAAATATTTGTAGGGACTGTATTTTATCGTTTCCATTCTTCGTGGTTGCCTAATAATCAAAGACGAGTGATACCTACAATCTCTGCTATGACGAAAACTGTTTCCACCACAATCTTCACTAGCTTCTATCATCATTCAAGCTCTCAATTTAGCCCTAACATAAGTTCTTCGCCTTTGAATAGTGAAGCAAATGAAGTACAAGAGCAAGAGCAGTGTAAGGGGAAGAATAATAATATTGAGAGCATTGTGTTGCCTAAAACATCTATTTTCTACTGTTTGAGAACCGTTTCTACCATAATATTTAGTAGCTCTGATGCTGGCACCTTCTCTTCTAACTCCTCCCATGCTCATGGTGCAATCTCTGTTTATCAACCTCATGCTAACAGTTCTTCACCTTTGAATGCTGAAGCAAGTGAATTACAAGAGCAGTGTAAGGGGAAGAATAATAATATTGAGAGCATTGTGTTGCCTAAAACATCTATTTTCTACTGTTTGAGAACCGTTTCTACCATAATATTTAGTAGTTCTGATGCTGGCACCTTCTCTTCTAACTCCTCCCATGCTCATGGTGCAATCTCTCTTCATCAACCTCAAGCTAACAGTTCTTCACCTTTGAATGCTGCAGCAAGTGAATTACAAGAGCAGTGGAAAGGGAAGAATAATAATATTGGGAGTATTGTGTTGCCTGGAACATCTATTTTCTACTACTTGAGAACCGTTTCTACCATAATATTTAGTACTTCGGATTCTGGCACCAACTCTTCTGGCTCCTCCCATGCTCATAAAGAAATCTCTCATCATCAACCTAATGCTAATAGGTTGCTTATTCATTATTATTCAATTTCTTTTTATGTTTGTTCAACTGATGAAGTAAAAGAGTACACTGTCCTCAGTAACCAGCCCAAGTGGAAGAGAGGAAAACTTCTAGGGCAAGGAGGATTTGGGCGCGTTTATAAAGGATTTAACAGTGAAACTGGACAAATATGCGCAATTAAAGAAGTTCTCGTTGACGCTGATGATGAGAGATCAGAAAAGTGCCTTCAACAACTTTTTCAATTTACCATGTTTGGAAAACGGGATGTCATATATTCTTTGTGGGGAACTTTTAGATATTTGCAAAAATTCTACAAAGAAAGCTTTGTTGCTGAGACATCTCTGCAATATTCATATTCGCGGAATGATATGAATCTCTCCTATCTTAATCGCTTCTCTGAGCGTCTCGTTGCTCCTCTCTACTCTACAACTCCCATCAGGAGCCACAAGACGGATGACTTTGCTATTGAGGGTCGTAACCTGAATTTCTCGTTCCCCTCAAGGCAGGTGAAAGCTGTACCAATTCTTCGGGATTGTTCAATTCGCATCCCTTCTGGGCAGTTTTGGATGCTTCTTGGACCCAATGGATGTGGGAAATCTACCCTCTTAAAGATATTAGCTGGTCTCTTGAATCCTACTTCAGGAACTGTGTACGTGAAGGGGCCCAAAAGTTTTGTTTTCCAAAATCCAGATCATCAGGTGGTAATGCCTACAGTGGAAGCTGATGTGGCATTTGGTCTTGGCAAGTTCAATCTGACCCGTGATGAAGTGAGATCAAGGGTATCAAGAGCCTTGCAAGCTGTGGGCATGTCTGACTACATGCAGAGATCTGTTCAAACTCTAAGTGGTGGTCAGAAGCAGAGGGTTGCCATTGCTGGTGCTTTAGCAGAAGCTTGTAAAGTTCTGTTGTTGGATGAGCTCACAACCTTCTTAGATGAAAGTGACCAGGTTGGTGTTATCAAAGCAGTTAGGAACTCTCTGGATACCTCAGCAGGGGTTACTGCATTGTGGGTGACCCATCGTTTAGAAGAATTGAACTATGCTGATGGTGCTGTGTACATGGAGGATGGGAAAGTTGTGATGGTTGGAGATGCAGAAAGAATAAAAAGTTTCATTGAAGCCAGGCAATCCGACTATATCAAACAGATAAATTCTTGA 2034 0.4081 MRLSQVSLPLRVLEGFKLRFKQIFVGTVFYRFHSSWLPNNQRRVIPTISAMTKTVSTTIFTSFYHHSSSQFSPNISSSPLNSEANEVQEQEQCKGKNNNIESIVLPKTSIFYCLRTVSTIIFSSSDAGTFSSNSSHAHGAISVYQPHANSSSPLNAEASELQEQCKGKNNNIESIVLPKTSIFYCLRTVSTIIFSSSDAGTFSSNSSHAHGAISLHQPQANSSSPLNAAASELQEQWKGKNNNIGSIVLPGTSIFYYLRTVSTIIFSTSDSGTNSSGSSHAHKEISHHQPNANRLLIHYYSISFYVCSTDEVKEYTVLSNQPKWKRGKLLGQGGFGRVYKGFNSETGQICAIKEVLVDADDERSEKCLQQLFQFTMFGKRDVIYSLWGTFRYLQKFYKESFVAETSLQYSYSRNDMNLSYLNRFSERLVAPLYSTTPIRSHKTDDFAIEGRNLNFSFPSRQVKAVPILRDCSIRIPSGQFWMLLGPNGCGKSTLLKILAGLLNPTSGTVYVKGPKSFVFQNPDHQVVMPTVEADVAFGLGKFNLTRDEVRSRVSRALQAVGMSDYMQRSVQTLSGGQKQRVAIAGALAEACKVLLLDELTTFLDESDQVGVIKAVRNSLDTSAGVTALWVTHRLEELNYADGAVYMEDGKVVMVGDAERIKSFIEARQSDYIKQINS 677
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele22g1505 677 Gene3D Phosphorylase Kinase; domain 1 307 400 - -
Lele22g1505 677 ProSitePatterns ABC transporters family signature. 573 587 IPR017871 GO:0005524|GO:0016887
Lele22g1505 677 SMART AAA_5 477 640 IPR003593 -
Lele22g1505 677 PANTHER ABC TRANSPORTER I FAMILY MEMBER 10 448 662 - -
Lele22g1505 677 Gene3D - 443 676 IPR027417 -
Lele22g1505 677 CDD ABC_cobalt_CbiO_domain1 449 650 IPR015856 GO:0005524|GO:0016020|GO:0055085
Lele22g1505 677 FunFam ABC transporter I family member 10 444 674 - -
Lele22g1505 677 MobiDBLite consensus disorder prediction 68 88 - -
Lele22g1505 677 Pfam ABC transporter 468 600 IPR003439 GO:0005524
Lele22g1505 677 SUPERFAMILY Protein kinase-like (PK-like) 298 394 IPR011009 -
Lele22g1505 677 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 448 673 IPR003439 GO:0005524
Lele22g1505 677 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 438 663 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele22g1505 Lele-ChrLele22 20757188 20767261 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele22g1505 448 676 Calmodulin-binding Proteins AT2G36910 29.719 1.29e-18 89.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Lele22g1505 ABC_tran 6.9e-26 CL0023