Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele22g1502 ATGGATTGCAGCTGTAAAATGAAGCATATTGAGCCCCTTGAGGAATATCTTTCAACATCATTTGGTGTTTTTGGAGAGTCTTACCCGCCTCCTTCCCTGGGTTCCATTTTGCAGATGTCTTTTTATCTCCTAAAGGGATCGACATCCATTGTTAGGTGCCTTTTTAGCTTCATGAACCGGGGGAGGCTGTGGTATTTATTGATGGCTACGACGAAATTGGTTCCTGGGTTTCGGTTTCATCCGACTGATGTTGAACTCCTCAGATACTTTCTCAGGAGGAAGGTTATGGGTAAGAAATTTCCGAATGATGTGATTGCTGAAGTAGAAATATACAAGTTCGCTCCGTGGGATCTCCCTGATAAATCTTACCTGCGAACTGGAGATTTGGAATGGTACTATTTTTGCCCCAGAGAAAAGAAATATGCCAGTGGGGCCAGAATGAATCGTGCTACCAAAGTTGGGTACTGGAAAACTACTGGGAGGGATAGACCTGTTCATCACAGGAATCAACCTGTGGGAATGATAAAAACCCTGATATTTCACACTGGTAGAGCTCCTAAAGGAGATAGGACTGATTGGGTCATGCATGAATATAGGCTCGAAGATCAGGATCTGACTGATAAAGACATTCCTCAGGATTCCTATGTGCTTTGTAGGGTTTTTCAAAAAGATGGTCCTGGTCCTAGGAATGGTGCACAATATGGAAGACCATTCAATGATGAAGATTCTGATGGTGACGACGAAATTGATGGTGTAGGATCTCTCCCATTAGTTGGTGTGCGTGCACCAATTACCATTCATCCTAATACACCTGGCAGTTCTGTGGCAACTTATAGTCATCCCCCTGCAAGTACATGCATTGGATCACCACCAGACTCATGTCTTATGCATCCTTCTGTTCCAAGTAATCAAGTTATATCCACTAATGGGTGTCAAGTTCCAGTTGTTGATGATATTGATGCATTGTTAGATTGCTTCATAGCGAATGACACAGTGGCTATGACTGAAAATAACATTGAGGTACGCCATCTATTTCTTTCTCTTGATGCTTGTGCATTCTTTTGTAAAGTCTGGGTGCAAAAGAATGATAATTCTGCTGTGGAGAAGGAAGCTGAAGAAGAACCTTGTGTGGATGTGAATGATATATTTAAGGAATTGGGAGACCTTGACAATACAAACACAAACCAAATGTATCATCATGTTAATGATATATTTAAGGATTTGGGAGACCTTGACGACAATGCAAACCAAATGCATGCTGCAAGTAACATGCCCTTGATGTTCGATGATGATTTGGATTTCTTGGAGTTGCGTGACCTGGACACCAAGGTCCCCCACCAGGCTGAACCAGAGAGTGGGGACCATTTCATCCAGAAAAAGGAGGGTAAGGGTATGTGA 1398 0.4256 MDCSCKMKHIEPLEEYLSTSFGVFGESYPPPSLGSILQMSFYLLKGSTSIVRCLFSFMNRGRLWYLLMATTKLVPGFRFHPTDVELLRYFLRRKVMGKKFPNDVIAEVEIYKFAPWDLPDKSYLRTGDLEWYYFCPREKKYASGARMNRATKVGYWKTTGRDRPVHHRNQPVGMIKTLIFHTGRAPKGDRTDWVMHEYRLEDQDLTDKDIPQDSYVLCRVFQKDGPGPRNGAQYGRPFNDEDSDGDDEIDGVGSLPLVGVRAPITIHPNTPGSSVATYSHPPASTCIGSPPDSCLMHPSVPSNQVISTNGCQVPVVDDIDALLDCFIANDTVAMTENNIEVRHLFLSLDACAFFCKVWVQKNDNSAVEKEAEEEPCVDVNDIFKELGDLDNTNTNQMYHHVNDIFKDLGDLDDNANQMHAASNMPLMFDDDLDFLELRDLDTKVPHQAEPESGDHFIQKKEGKGM 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele22g1502 465 Gene3D NAC domain 82 225 IPR036093 GO:0003677|GO:0006355
Lele22g1502 465 ProSiteProfiles NAC domain profile. 73 223 IPR003441 GO:0003677|GO:0006355
Lele22g1502 465 MobiDBLite consensus disorder prediction 443 465 - -
Lele22g1502 465 FunFam Nac domain-containing protein 86 82 226 - -
Lele22g1502 465 MobiDBLite consensus disorder prediction 226 246 - -
Lele22g1502 465 Pfam No apical meristem (NAM) protein 75 200 IPR003441 GO:0003677|GO:0006355
Lele22g1502 465 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 72 333 - -
Lele22g1502 465 SUPERFAMILY NAC domain 64 223 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele22g1502 Lele-ChrLele22 20722330 20727463 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele22g1502 68 343 NAC Transcription Factor Family AT5G09330 49.828 1.48e-87 274
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lele22g1502 NAM 5.4e-34 No_clan