Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele22g1490 ATGACCACTCTTCCCAGGAATTCCCACTCCTTCTTTCTTCCGAAATCTTCTTTCCTTCTCTTTTCCATGGCTTCTCTTCTTTCTCTTTCCCTTCTCTCCTTCTTCCTCTTCCTTTCTCTCTCCTCCGCCGCTCGCCACCACCGGAAACCACCCACCACCACCCCCTCTACCTCCTCCTCTGTTGTCGTAGAGAACGCCTGCAAGGCCACTCGCTTCCCTGAACAATGTCGATCTTCTCTAACCAAACTCCCTCCCGATCCCACTCCAGTTAAAATCCTCCAATCCGCCTTGTCCGTGTCGTCGGAGAATCTCAAGACGGCGCAATCCATGGTCAAGTCCATCCTCGACTCATCGGCTTCCAGTATCAACCGCTCCACCGCTTGCCAAGTCTGCATGGAGGTGCTCCCTGACTCCGCCTACCGCATCGGTCTGGTCAATGACGCGCTGCCGCGTGGCAGGACGAAGGACGCTCGCGCATGGATGAGCGCCGCCTTGCTATACCAGTACGATTGCTGGTCGGCTTTGAAGTACGCCAATGACACTCACCAGGTCGGTGAGGCGATGGCCTTCTTGGACTCACTCACCAGGATCTCCAGCAACGCGTTGAGCATGATAGCGTCGTACGACGTCGTCGGGAATGTCACCGCGTCGTGGAGGCCACCTTTAACGGAGCGCAATGGGTTCTGGGAAGGATCCGGGTCGGGTTCTGGGTCGTTGGGTTTCAGGGGTGGGTTACCGGCGAAAGTGAAGCCGGATGTTACAGTGTGTAAGGACGGAGGGAATGGGTGTTACAAGACGGTGCAGGAGGCTGTTAACGCCGCTCCGGATAACGCCGGCAACAAGAAATTTGTGATATACATTAAGGAAGGTGTTTATGAAGAGACTGTTAGGGTTCCGTTGGAGAAGAAGAATGTGGTGTTTTATGGCGACGGAATAGGGAAGACCGTCATCACAGGGTCTGCTCAGGCGGATCAACCCGGAATGACGACATACCTTTCAGCTACCGTTGCTGTTCTGGGTGATGGATTCATGGCCAAGGGTCTTACAATCCAGAACACAGCAGGCCCTGTTGCTCATCAAGCAGTGGCCTTAAGATCAGACAGCGATTTCGCTGTGTATGAAGAATGCGAATTCATAGGCAATCAAGACACACTCTATGCTCATTCCCTTCGCCAATTCTTCAAATCATGCCGCATCCTGGGCAACGTAGACTTCATCTTTGGGAACTCCGCTTCCATCTTCCAAGATTGCCAAATCCTAGTCCGGCCCCGGCAAGTGAAGCCGGAGAGTGGCGAGATCAATGCAGTCACTGCACATGGCAGAACAGACCCTGCCCAAACCACTGGCTTTGTTTTCATGAACTGCTTGATCAATGGGACCAAGGAGTACATGGATTTGTACCATAGCAAGCCTCAGAAGCACAAGAACTACTTGGGGAGGCCATGGAAGGAGTACTCAAGAACAGTGTTCATTAACTCATTCTTAGAAGCTCTGATAGCTCCCACTGGGTGGAAGCCATGGAGTGGTCAATTTGCACTGAGGACACTTTACTATGGAGAATATGCCAACACAGGACCTGGTTCTGATCTGAGTCAGAGAGTTCCATGGAGTAGCAAGGTCCCACCTGAACACTTGTCTGCATATTCAGTTCAGAATTTCATCCAAGGAGATGAGTGGATTCCTTCATCCATGATTAGCTCTTTAGATTTGTCATAG 1716 0.5186 MTTLPRNSHSFFLPKSSFLLFSMASLLSLSLLSFFLFLSLSSAARHHRKPPTTTPSTSSSVVVENACKATRFPEQCRSSLTKLPPDPTPVKILQSALSVSSENLKTAQSMVKSILDSSASSINRSTACQVCMEVLPDSAYRIGLVNDALPRGRTKDARAWMSAALLYQYDCWSALKYANDTHQVGEAMAFLDSLTRISSNALSMIASYDVVGNVTASWRPPLTERNGFWEGSGSGSGSLGFRGGLPAKVKPDVTVCKDGGNGCYKTVQEAVNAAPDNAGNKKFVIYIKEGVYEETVRVPLEKKNVVFYGDGIGKTVITGSAQADQPGMTTYLSATVAVLGDGFMAKGLTIQNTAGPVAHQAVALRSDSDFAVYEECEFIGNQDTLYAHSLRQFFKSCRILGNVDFIFGNSASIFQDCQILVRPRQVKPESGEINAVTAHGRTDPAQTTGFVFMNCLINGTKEYMDLYHSKPQKHKNYLGRPWKEYSRTVFINSFLEALIAPTGWKPWSGQFALRTLYYGEYANTGPGSDLSQRVPWSSKVPPEHLSAYSVQNFIQGDEWIPSSMISSLDLS 571
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele22g1490 571 Pfam Plant invertase/pectin methylesterase inhibitor 63 204 IPR006501 GO:0004857
Lele22g1490 571 Gene3D - 246 568 IPR012334 -
Lele22g1490 571 SUPERFAMILY Pectin lyase-like 249 565 IPR011050 -
Lele22g1490 571 SMART PMEI_2 58 204 IPR006501 GO:0004857
Lele22g1490 571 Pfam Pectinesterase 252 557 IPR000070 GO:0030599|GO:0042545
Lele22g1490 571 Gene3D Invertase/pectin methylesterase inhibitor family protein 58 208 IPR035513 -
Lele22g1490 571 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 63 205 IPR035513 -
Lele22g1490 571 FunFam Pectinesterase 246 569 - -
Lele22g1490 571 FunFam Probable pectinesterase/pectinesterase inhibitor 51 61 207 - -
Lele22g1490 571 CDD PMEI-like_3 66 209 - -
Lele22g1490 571 PANTHER PECTINESTERASE 40 561 - -
Lele22g1490 571 TIGRFAM PME_inhib: pectinesterase inhibitor domain 28 206 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele22g1490 Lele-ChrLele22 20653631 20655889 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele22g1490 55 559 Carbohydrate Esterase AT5G09760 65.558 0.0 708