Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lele22g1483 | ATGAAATCTCCGGTGAGTCTATGCACCGGAGTTACCTACGACCGTTCTAGCATCCAACGGTGGCTCAGCAACGGCAACAACACCTGCCCGGCCACCATGCAGGTTTTGCAAACCAAAGAATTTGTTCCTAACCGTACTCTACAGAGGCTTATCCAGATCTGGTCTGACTCGGTTCGAAACCGAGTCGGATCGGCCGATTCTCCGGCCCCCAGAACAGTCCCCTCACCGGATCAGGTCGTCGACTCTATGAAATACTTGGACGGCCACGGCGAGAACTGTCTCGATTCGTTAACGAGAATTGTATATTTCGCCGAAGAATCTGAAGAGAATCGGGAGTTCCTCGCGAACGCCGGCTCGAAAATCGGATCGGCGAGGATTCTGAAGTTCATCGCGGTGGATACCGAGTCCAAAGCCATTATAGCCGAAAAGGAAGGTTTAATGTCCGAATTGCTCAAATCAGTGGATCCCGACGAGGACCCGGCGCTAATCGATAACGCCTTGTCATGTTTGATTGCAATATCGACGCCGAAACGGAACAAGTTGAAATTGGTCCATCTCGGAGCTATCAAGACACTTTCGCAATTACTTTCCCGCTCAAATTCGAACACTTCCGTGACGGAAAAGGTTCTGAAACTTCTCGAAACGGTGTCGTCAACAAAAGAAGAAAGTGATGAAGGTAACGATCATGGCGACGGAGCACGCGGTGATGATACTGTGGACTGTGTGTTATCTGTTTCGCGATCAGAAGGCGCAGGAAGTGGTGGCAATGGCCAACGGTTTCACCAAATTTCTGCTTCTGATGCAGAGCAATTGTTCGCCGGCGGCTCGTCAAATGTCTGCCGATTTGCTAAAGGTTTTTCGCGTTAA | 867 | 0.5017 | MKSPVSLCTGVTYDRSSIQRWLSNGNNTCPATMQVLQTKEFVPNRTLQRLIQIWSDSVRNRVGSADSPAPRTVPSPDQVVDSMKYLDGHGENCLDSLTRIVYFAEESEENREFLANAGSKIGSARILKFIAVDTESKAIIAEKEGLMSELLKSVDPDEDPALIDNALSCLIAISTPKRNKLKLVHLGAIKTLSQLLSRSNSNTSVTEKVLKLLETVSSTKEESDEGNDHGDGARGDDTVDCVLSVSRSEGAGSGGNGQRFHQISASDAEQLFAGGSSNVCRFAKGFSR | 288 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lele22g1483 | 288 | SUPERFAMILY | ARM repeat | 92 | 217 | IPR016024 | - | |
Lele22g1483 | 288 | ProSiteProfiles | Armadillo/plakoglobin ARM repeat profile. | 187 | 222 | IPR000225 | GO:0005515 | |
Lele22g1483 | 288 | SMART | Ubox_2 | 1 | 54 | IPR003613 | GO:0004842|GO:0016567 | |
Lele22g1483 | 288 | MobiDBLite | consensus disorder prediction | 216 | 238 | - | - | |
Lele22g1483 | 288 | CDD | RING-Ubox_PUB | 1 | 34 | IPR045210 | - | |
Lele22g1483 | 288 | SUPERFAMILY | RING/U-box | 1 | 56 | - | - | |
Lele22g1483 | 288 | MobiDBLite | consensus disorder prediction | 216 | 236 | - | - | |
Lele22g1483 | 288 | Gene3D | - | 79 | 248 | IPR011989 | - | |
Lele22g1483 | 288 | Pfam | U-box domain | 1 | 57 | IPR003613 | GO:0004842|GO:0016567 | |
Lele22g1483 | 288 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 1 | 64 | IPR013083 | - | |
Lele22g1483 | 288 | PANTHER | WDSAM1 PROTEIN | 118 | 232 | IPR045185 | GO:0061630 | |
Lele22g1483 | 288 | ProSiteProfiles | U-box domain profile. | 1 | 61 | IPR003613 | GO:0004842|GO:0016567 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lele22g1483 | Lele-ChrLele22 | 20590016 | 20591127 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lele22g1483 | 1 | 235 | U-box Gene Family | AT3G18710 | 39.935 | 5.46e-54 | 179 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Lele22g1483 | 22 | 20590016 | 20591127 | Lele23g0519 | 23 | 3811872 | 3813107 | hybridization | |
Lele22g1483 | 22 | 20590016 | 20591127 | Lele24g1435 | 24 | 20298903 | 20300072 | hybridization |