Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele22g1479 ATGAGTGTGGCGAGGACAAGAAGCTCAGAGGAGTGTACTGGGCGTGCAAAGCCTCCTGATCCTGATATTCTTGAAATTGACCCAACTTGTCGCTACATTAGGTATAAAGATGTGATCGGCAAAGGTGCTTTTAAGACATGTTATAAGGCATTCGATGAAGTCAGTGGACTAGAAGTGGCCTGGAACCAGGTTCAGATTGATGAGGTGCTACAGTCACCAGGTGACTTGGAAAGGCTCTACTCAGAAGTGCATCTCTTAAAATCATTGAAGAACAATAACATTGTAAAATTCTACAATTCCTGGATTGATGATAAGAACAAGACTGTTAACATCATTACCGAGTTGTTCTCCTCGGGTAGCCTCAGACAGTATCGTAGGAAGCACAAGAAATTTGACATGAAGGCCGTCAAAGGATGGGCAAGACAGATTTTGATGGGTTTAAACTATCTCCATAGTCATAACCCACCTATTATACATAGGGATCTGAAGTGTGATAATATATTTATCAATGGAAACCAAGGTGAAGTTAAAATTGGCGATCTGGGGCTCGCAACTTTCTTGGAACGGGCTAATGCTGAGAGTGTGATTGGAACCCCTGAGTTTATGGCACCAGAGCTGTATGATGAAAATTACAATGAATTGGCTGACATATATTCATTTGGAATGTGCATGCTTGAGTTGGTGACTTCTGAGTATCCATATAGTGAATGTAAAAACTCAGCTCAGATATACAAGAAGGTTTCATCGGGTATAAAACCTGCTTCTCTTTCTAAAGTCAAAGATCCAGAGATGAAATTATTTATTGAGAAATGTCTAGTCCCAGCATGTCAAAGAATGTCAGCAAAGGATCTTTTGATGGACCCTTTTCTTCAAATTAATAGTTTGGCAAGACATCGTCGTCTATCATTACCAGATATTGTTATACCTAAATGTGGAGCCTTTGGAGATCGTATTCTTGTGTCAGAAGGTCCTGCTACTCAACGTAATGGAACAAATCTTTTGGATCTTGATGAGACTTGTGAATCACCTGTGATCACTATATATGATGGTTCTAGTGACACTTCATGTTCTCCATGTGTTGAGATACGAAAGTTGAAGGGAGGCGATATTTTCACTCTAAAAGGTGAAGAAAATGATGAGAATTCTGTATCAATAGGTGTTCGGATAGCTGATCAAGGCGGTCGAGCCAGAAATATTCACTTCCTATTCTACCTTGATAGTGATACTGCTAGTTCTGTTTCTAGTGAGATGGTTGAGCAACTCGAACTTCCAGATCAAAATGTAAAATTTATAGCTGAGCTGATGGACTTGTTATTGGTTAATTTGGTTCCCAAATGGAAACCTTGTGTAGATATTGCTCATTTGGCTTTGGGAAGTTGTAAAAGAACTATGGCTGGACAAAAAGATTTGGAATCTACAAAACAAAAACAACCTTCAGAAGATTCTATGCATAATATTACTCAAGAGAAAGGTATCTCACACTCGATTGGAAGGTCAGGTGCATTAGAAAACCATCATCACCCTAACTTGGATGAATTTTTATCCCAAGCCAACATAGATCGAAATACAATTAGAGTAGATGATTTGTGTTCTGAATTTTCACGTGCTTCTATAACATCTGACATAAACGATAGGAAGTTATCTTTAGTTTCATTCTTATCTGTGGATTCAGCATTTCATGACTTCAACTTGCCCAGAGTACCAGGAGGAACTGAATGTTCTTTTGTATCTATAATGGAAGCATGTCCTGATTATGTTAGGAGTAAGAATTCAGAATCAGGAAGTCATGATATGTTGAACTTTCCAACCCATTCTAATAATGTGACTTCTCTATCTACTGTAGAAGATGGGTTAAAAATAGAGTTAGATATGATTGAACAGAAATACCTAGAGACAATTAAGGAAGCATCAAGAATAAGATCTGAAGCTATCATGGAAGCCCGAAGAAGATCATCGCAGAAGAAGATTCAATCATAA 1977 0.3829 MSVARTRSSEECTGRAKPPDPDILEIDPTCRYIRYKDVIGKGAFKTCYKAFDEVSGLEVAWNQVQIDEVLQSPGDLERLYSEVHLLKSLKNNNIVKFYNSWIDDKNKTVNIITELFSSGSLRQYRRKHKKFDMKAVKGWARQILMGLNYLHSHNPPIIHRDLKCDNIFINGNQGEVKIGDLGLATFLERANAESVIGTPEFMAPELYDENYNELADIYSFGMCMLELVTSEYPYSECKNSAQIYKKVSSGIKPASLSKVKDPEMKLFIEKCLVPACQRMSAKDLLMDPFLQINSLARHRRLSLPDIVIPKCGAFGDRILVSEGPATQRNGTNLLDLDETCESPVITIYDGSSDTSCSPCVEIRKLKGGDIFTLKGEENDENSVSIGVRIADQGGRARNIHFLFYLDSDTASSVSSEMVEQLELPDQNVKFIAELMDLLLVNLVPKWKPCVDIAHLALGSCKRTMAGQKDLESTKQKQPSEDSMHNITQEKGISHSIGRSGALENHHHPNLDEFLSQANIDRNTIRVDDLCSEFSRASITSDINDRKLSLVSFLSVDSAFHDFNLPRVPGGTECSFVSIMEACPDYVRSKNSESGSHDMLNFPTHSNNVTSLSTVEDGLKIELDMIEQKYLETIKEASRIRSEAIMEARRRSSQKKIQS 658
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele22g1479 658 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 18 531 - -
Lele22g1479 658 Pfam Protein kinase domain 36 290 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele22g1479 658 CDD STKc_WNK 31 290 - -
Lele22g1479 658 MobiDBLite consensus disorder prediction 1 20 - -
Lele22g1479 658 ProSiteProfiles Protein kinase domain profile. 33 290 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele22g1479 658 FunFam Probable serine/threonine-protein kinase WNK1 18 114 - -
Lele22g1479 658 SUPERFAMILY Protein kinase-like (PK-like) 35 327 IPR011009 -
Lele22g1479 658 Gene3D Phosphorylase Kinase; domain 1 19 114 - -
Lele22g1479 658 ProSitePatterns Serine/Threonine protein kinases active-site signature. 157 169 IPR008271 GO:0004672|GO:0006468
Lele22g1479 658 SMART serkin_6 33 290 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele22g1479 658 Gene3D Transferase(Phosphotransferase) domain 1 116 296 - -
Lele22g1479 658 FunFam probable serine/threonine-protein kinase WNK9 116 295 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele22g1479 Lele-ChrLele22 20551009 20553971 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele22g1479 133 496 MAP Kinase Kinase Kinase AT1G49160 64.305 2.85e-164 476
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Lele22g1479 Pkinase 9.2e-51 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele22g1479 22 20551009 20553971 Lele23g0521 23 3854578 3857186 hybridization
Lele22g1479 22 20551009 20553971 Lele24g1431 24 20264190 20268014 hybridization