Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele22g1469 ATGTTTCCAAATTCCCAATCCCTTCAGACTTCAGACTCAAAAGCTTTCGGTTTAATGGCCACTAAGCTAGTTCACCCATCAATGGCTGATTCCCATCTCAACCCTATCATTTTCAGAACCATGAACACCACCAAGCTCCAACGATATGGCACACCTAGCCCTCGTTCAAAACCAAACACTTTATTATCATCAAGATTTGCAGACACCTCTTGTGGATTCTTCAGACCCGTCACTATCACAAAAGTTGCAGAACACAGTTCTGGTTTGCTTGGTGATGAAGAACTTTCCTCCAGCAAATCTGCACTTTACGAAGCTGTTCAAGGGATTAACAGGGGAATTTTTGGAATCAATTCTAAGAAGAAATCTGAGATTGAAACTCTAGTGAAGGAGCTAGAATCTCTGAATCCAACTCCAGATCCTACTCTCAATTTGGACAAGATGGCTGGGTGCTGGAGACTTGTTTACAGCACAGTCTCAATTCTGGGTTCCAAGAGAACAAAGTTAGGCCTCAGAGATTTCATCTCATTGGATGATTTCTTCCAGATTATTGATGTAGCCGAGAGCAAAGCAGTGAATGTGATAAAGTTCAGCGCAAAGGGGTTGAGGTTGTTGAATGGACAACTTAGTATTGAGGCCTCTTTCAAGATTGCATCCTCAACAAGAGTTGTCATTAATTTCGAGAACTCCACTATCACTCCAGACCAGTTAATGAATGTGTTTCGGAAGAACTATGATGTTTTGTTGAGCATCTTCAATCCACAGGGATGCCTGGACATCACGTATCCTAACACAACCTTACGTCCCTTATGCTACAGAATTCTAGTTTACCTGAAAACTCCATTCACCAACGGAGTCACACGGAGGAGGGTGGTGGTTAGCCTTTCTCTGATGGACTTCAAGACCAACAGGAGATTAGGGGAGCTAGGGTATAATAGGAATGCTAAGAAATGCCAGGAGAAGTTTGAAAATGTGTACAAGTACTACAGAAGGACCAAGGGAGGTGAAATTCAACATCCTTACCCCGAAAAGAATGAAGAACAAGTGGAAAACATAGCAACAACTACAACCCCAATGGATTTGTCCAATGTTATTCAAGATTCAATTCCACATTCCATTCGATTCTCTGGTGACCCCTCTGGTTCAGCTACTCTCTCTTCGAGCGAAGAATCAGAGGAAGATATTCGAAAGAAGAAAAGGAAACTGACGAAGTATTTTGAGAAGTTGATGAACAAAGTCGTAGAGAAGCAAGCGAAGCTACATAAGAACTTTATGGAGGTGTTACTCAAATGTGAACAAGATAGAATGGCAAGAGAGGAAGCATGGAAGATGCAAGAATTAGCTAGGATAAAGAGGGAACGAGAGGTTTTAGCTCAAGAAAGATCAATTGCGGCGGCAAAAGATGCTGCAGTGCTTGCCCTTCTGAGAAAGTTCGCAGGACAATCAGGGACCATAGAATTACCTGAGAACCTACTTCCAAATGATTTAGATAAGGACGAGCAAGAAAATGACAATGCAGGCAGTGTTGTTGAAAAGCAAGAATGTAGAAATGGTGGGAATTTCACACTGACGAGTCCATCTTCCTCTAGATAG 1590 0.4214 MFPNSQSLQTSDSKAFGLMATKLVHPSMADSHLNPIIFRTMNTTKLQRYGTPSPRSKPNTLLSSRFADTSCGFFRPVTITKVAEHSSGLLGDEELSSSKSALYEAVQGINRGIFGINSKKKSEIETLVKELESLNPTPDPTLNLDKMAGCWRLVYSTVSILGSKRTKLGLRDFISLDDFFQIIDVAESKAVNVIKFSAKGLRLLNGQLSIEASFKIASSTRVVINFENSTITPDQLMNVFRKNYDVLLSIFNPQGCLDITYPNTTLRPLCYRILVYLKTPFTNGVTRRRVVVSLSLMDFKTNRRLGELGYNRNAKKCQEKFENVYKYYRRTKGGEIQHPYPEKNEEQVENIATTTTPMDLSNVIQDSIPHSIRFSGDPSGSATLSSSEESEEDIRKKKRKLTKYFEKLMNKVVEKQAKLHKNFMEVLLKCEQDRMAREEAWKMQELARIKREREVLAQERSIAAAKDAAVLALLRKFAGQSGTIELPENLLPNDLDKDEQENDNAGSVVEKQECRNGGNFTLTSPSSSR 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele22g1469 529 PANTHER PLASTID-LIPID-ASSOCIATED PROTEIN 4, CHLOROPLASTIC-RELATED 56 267 IPR039633 -
Lele22g1469 529 MobiDBLite consensus disorder prediction 372 387 - -
Lele22g1469 529 Pfam PAP_fibrillin 98 249 IPR006843 -
Lele22g1469 529 Gene3D - 300 330 - -
Lele22g1469 529 MobiDBLite consensus disorder prediction 487 529 - -
Lele22g1469 529 MobiDBLite consensus disorder prediction 372 395 - -
Lele22g1469 529 MobiDBLite consensus disorder prediction 491 508 - -
Lele22g1469 529 Coils Coil 387 407 - -
Lele22g1469 529 MobiDBLite consensus disorder prediction 514 529 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele22g1469 Lele-ChrLele22 20475224 20479854 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele22g1469 404 478 Trihelix Transcription Factor Family AT1G76880 56.000 1.13e-21 97.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele22g1469 22 20475224 20479854 Lele23g0532 23 3915476 3917270 hybridization
Lele22g1469 22 20475224 20479854 Lele24g1418 24 20188093 20193951 hybridization