Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lele22g1458 | ATGTGCTTCTTAAAGGTAGCGAATCCTACATACAACCTTGTTGATGAACACAACACAAACCCTAACGTTTCTTGTTCGTCGTCGCTGACAATTCAGTTTCCGGGTATGGATAGGGACAGAGAGATGTCTGAGATGATCTCTGCTTTGACGCACGTCGTTGCCGGAGATATTCCTGGTGATTCCAGTGAGATTTCTGGCGGTGGCGGCCGTGGTTGCGGTGAAGGTGACGGTGGAGGTGAAGGGGGCTCTGTTACATTAAACTCGCCGTCGGATTCAACGACAACGCCGTCTTCTTCATCCTATTCTTCGTCTTACGGTGGTAACTCTGTTTTGAAGAGAAGAAGGGAAGATAATATTACAGGCTCTTCTTCCGCTGCTAGTATTCAAACAGGAGAAGGTTCAAGAGGAGAGAGAGTAGTGCAAATGGGGAATGCAGTGTATGAATATAGCTGTAATACAGAGAATGTGAGAGGCTCAGAAGAAGGAAGAAGAAAGTACAGAGGAGTGAGACAGAGGCCATGGGGCAAGTGGGCAGCTGAAATCAGAGATCCTTTTAAAGCTGCCCGTGTTTGGTTGGGCACTTTCGACACGGCGGAGGCGGCTGCCCAGGCCTATGACGAAGCTGCCCTGCGTTTCAGAGGCAACAAGGCCAAGCTCAATTTCCCCGAAAATGTCAGACTCCGGCAACCCCCTCCGGCGCCTCAGGCGACAACGGCGGCGGCGACCCATTTGAGAGGTTCGGGTTCTTCGAGTACCCTTTTGTCCATTCCAACGTCCACCGAACCGATTGTTCATACTGAAGCCCTTCACCACCGCCACCCTCTCATGAGTTCTCAGCCGACGGCGTCCACTGATTTTTATAGCTACTCGCAGTTTTCGGAGTTTCCCATGAATTTTTATGATCAAATGGTTATGTCATCTTCAATAGCTCATCATTTTCAGTCGTCCACGTTGCCGTCAGCTTTGTCATCTTCTTCTTCTTCTTTGATGGCATCTTCTATTAGCTCTCAGCATCAGCAAGGAGGTTTACCGTTTCCGGGTTGGGTCATACCGGAAAGTGGTTCCGAATACGTACCATCAGCATGGTCATCTTCGGGTCATAGTGCTTCTTCCTCTGTATGA | 1122 | 0.4947 | MCFLKVANPTYNLVDEHNTNPNVSCSSSLTIQFPGMDRDREMSEMISALTHVVAGDIPGDSSEISGGGGRGCGEGDGGGEGGSVTLNSPSDSTTTPSSSSYSSSYGGNSVLKRRREDNITGSSSAASIQTGEGSRGERVVQMGNAVYEYSCNTENVRGSEEGRRKYRGVRQRPWGKWAAEIRDPFKAARVWLGTFDTAEAAAQAYDEAALRFRGNKAKLNFPENVRLRQPPPAPQATTAAATHLRGSGSSSTLLSIPTSTEPIVHTEALHHRHPLMSSQPTASTDFYSYSQFSEFPMNFYDQMVMSSSIAHHFQSSTLPSALSSSSSSLMASSISSQHQQGGLPFPGWVIPESGSEYVPSAWSSSGHSASSSV | 373 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lele22g1458 | 373 | PRINTS | Ethylene responsive element binding protein signature | 166 | 177 | IPR001471 | GO:0003700|GO:0006355 | |
Lele22g1458 | 373 | PRINTS | Ethylene responsive element binding protein signature | 188 | 204 | IPR001471 | GO:0003700|GO:0006355 | |
Lele22g1458 | 373 | Gene3D | AP2/ERF domain | 164 | 224 | IPR036955 | GO:0003700|GO:0006355 | |
Lele22g1458 | 373 | ProSiteProfiles | AP2/ERF domain profile. | 165 | 222 | IPR001471 | GO:0003700|GO:0006355 | |
Lele22g1458 | 373 | PANTHER | DNA-BINDING DOMAIN | 129 | 306 | IPR044808 | GO:0003700|GO:0009873 | |
Lele22g1458 | 373 | SMART | rav1_2 | 165 | 228 | IPR001471 | GO:0003700|GO:0006355 | |
Lele22g1458 | 373 | CDD | AP2 | 165 | 224 | IPR001471 | GO:0003700|GO:0006355 | |
Lele22g1458 | 373 | Pfam | AP2 domain | 165 | 214 | IPR001471 | GO:0003700|GO:0006355 | |
Lele22g1458 | 373 | SUPERFAMILY | DNA-binding domain | 165 | 223 | IPR016177 | GO:0003677 | |
Lele22g1458 | 373 | FunFam | Ethylene-responsive transcription factor 2 | 164 | 223 | - | - | |
Lele22g1458 | 373 | MobiDBLite | consensus disorder prediction | 83 | 109 | - | - | |
Lele22g1458 | 373 | MobiDBLite | consensus disorder prediction | 56 | 137 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lele22g1458 | Lele-ChrLele22 | 20401556 | 20403381 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lele22g1458 | 173 | 311 | AP2-EREBP Transcription Factor Family | AT5G64750 | 51.389 | 1.12e-36 | 135 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | AP2/ERF-ERF | Lele22g1458 | AP2 | 1.1e-14 | CL0081 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Lele22g1458 | 22 | 20401556 | 20403381 | Lele22g1458 | 22 | 20401556 | 20403381 | ECH | |
Lele21g1465 | 21 | 23055134 | 23056898 | Lele22g1458 | 22 | 20401556 | 20403381 | ECH | |
Lele22g1458 | 22 | 20401556 | 20403381 | Lele23g0547 | 23 | 4013582 | 4015354 | hybridization | |
Lele22g1458 | 22 | 20401556 | 20403381 | Lele24g1410 | 24 | 20108499 | 20110499 | hybridization |