Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele22g1453 ATGTCTTCTGCAAGCAAGGGCGAAAGGAAGGCTGCCATTGATGCAGCTTCATGGTTGTTCAACGTGGTCACATCTGTAGGAATAATCATGGTGAATAAAGCCCTGATGGCTAAATATGGTTTTACTTTTGCTACTACATTAACTGGCCTGCATTTTGCCATCACAACTTTGTTGACGACCTTTCTTAAGTGGCTGGGATATATCCAGACCTCTAACCTTCCATTACCCGATCTCATCAAATTTGTTTTATTTGCAAACTTTTCCATTGTTGGAATGAATGTGAGTTTGATGTGGAACTCAGTTGGATTCTATCAGATCGCTAAGTTGAGTATGATTCCAGTATCTTGTTTTCTGGAAGTTGTCTTGGACAATGTGCGGTATTCAAGGGACACAAAGCTTAGCATTATGTTGGTTCTCCTTGGTGTTGCTGTTTGTACAGTCACTGATGTAAGCGTCAATGCTAAGGGGTTTATAGCCGCTGTAGTGGCAGTTTGGAGCACCGCACTGCAGCAGTATTATGTACATTTTCTTCAGAGGAAGTATTCTCTTGGATCGTTTAACTTGTTGGGCCATACTGCCCCAGCACAAGCAGCAAGTCTGCTGTTAACAGGTCCCTTTGTGGACTACTGGTTGACAAATAAACGAGTTGATGCTTTCAACTTTGGTCTGGCATCCACTTTCTTCATTATTCTATCATGCTGTATCGCGGTAGGGACAAACCTGAGCCAATTCATCTGCATCGGCCGGTTCACAGCCGTGTCATTCCAAGTCATCGGCCACATGAAGACCATTCTGGTCCTCATCTTGGGGTTCCTTCTGTTTGGAAAGGAGGGTCTGAATCTTCAAGTAGTTCTAGGCATGATCGTTGCAATACTGGGAATGATCTGGTATGGCAATGCATCTTCTAAGCCTGGAGGCAAGGAGCGTCGTAGCTTGTCAATTCCCACTACCAAATCAGCAGATTATAGTGCAGTACCAGTTTCATCTGAATCCGATGAAAAGGTTGATTTAAACAACTTCCATTCACACCAACCACCTTTTCAGGAGGCGGTTGTTGATGATGGTACCTAG 1071 0.4388 MSSASKGERKAAIDAASWLFNVVTSVGIIMVNKALMAKYGFTFATTLTGLHFAITTLLTTFLKWLGYIQTSNLPLPDLIKFVLFANFSIVGMNVSLMWNSVGFYQIAKLSMIPVSCFLEVVLDNVRYSRDTKLSIMLVLLGVAVCTVTDVSVNAKGFIAAVVAVWSTALQQYYVHFLQRKYSLGSFNLLGHTAPAQAASLLLTGPFVDYWLTNKRVDAFNFGLASTFFIILSCCIAVGTNLSQFICIGRFTAVSFQVIGHMKTILVLILGFLLFGKEGLNLQVVLGMIVAILGMIWYGNASSKPGGKERRSLSIPTTKSADYSAVPVSSESDEKVDLNNFHSHQPPFQEAVVDDGT 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele22g1453 356 Pfam Triose-phosphate Transporter family 24 297 IPR004853 -
Lele22g1453 356 MobiDBLite consensus disorder prediction 312 326 - -
Lele22g1453 356 MobiDBLite consensus disorder prediction 337 356 - -
Lele22g1453 356 MobiDBLite consensus disorder prediction 302 330 - -
Lele22g1453 356 PANTHER SOLUTE CARRIER FAMILY 35 17 301 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele22g1453 Lele-ChrLele22 20352882 20356333 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele22g1453 93 321 Organic Solute Cotransporters AT1G53660 25.862 8.82e-12 62.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele22g1453 22 20352882 20356333 Lele22g1453 22 20352882 20356333 ECH
Lele21g1458 21 22985310 22988903 Lele22g1453 22 20352882 20356333 ECH
Lele22g1453 22 20352882 20356333 Lele23g0555 23 4081966 4085559 hybridization
Lele22g1453 22 20352882 20356333 Lele24g1403 24 20059048 20061043 hybridization